2VBL
Molecular basis of human XPC gene recognition and cleavage by engineered homing endonuclease heterodimers
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA ENDONUCLEASE I-CREI | polymer | 153 | 17640.3 | 1 | UniProt (P05725) Pfam (PF00961) | CHLAMYDOMONAS REINHARDTII | AMEL3-4-MG, 23S RRNA INTRON PROTEIN |
| 2 | B (B) | DNA ENDONUCLEASE I-CREI | polymer | 153 | 17469.2 | 1 | UniProt (P05725) Pfam (PF00961) | CHLAMYDOMONAS REINHARDTII | AMEL3-4-MG, 23S RRNA INTRON PROTEIN |
| 3 | C (C) | 5'-D(*DT*DC*DT*DG*DC*DC*DT*DT*DT*DT*DT*DT *DGP*DAP)-3' | polymer | 14 | 4227.7 | 1 | |||
| 4 | D (E) | 5'-D(*DT*DT*DA*DG*DG*DA*DT*DC*DC*DT*DT*DC *DAP*DAP)-3' | polymer | 14 | 4254.8 | 1 | |||
| 5 | E (S) | 5'-D(*DA*DA*DA*DA*DG*DG*DC*DA*DG*DAP)-3' | polymer | 10 | 3111.1 | 1 | |||
| 6 | F (T) | 5'-D(*DA*DG*DG*DA*DT*DC*DC*DT*DA*DAP)-3' | polymer | 10 | 3053.0 | 1 | |||
| 7 | G, H, I (C, E) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
| 8 | J, K, L, M, N... (A, B, C, E, S...) | water | water | 18.0 | 394 | Chemie (HOH) |
Sequence modifications
A: 1 - 153 (UniProt: P05725)
B: 1 - 153 (UniProt: P05725)
| PDB | External Database | Details |
|---|---|---|
| Glu 28 | Lys 28 | conflict |
| Ala 31 | Gln 31 | conflict |
| Arg 38 | Gln 38 | conflict |
| Lys 40 | Ser 40 | conflict |
| Thr 42 | Ala 42 | conflict |
| Lys 44 | Gln 44 | conflict |
| Glu 70 | Arg 70 | conflict |
| Asn 75 | Asp 75 | conflict |
| Arg 85 | His 85 | conflict |
| Thr 109 | Ile 109 | conflict |
| Glu 110 | Trp 110 | conflict |
| Gln 111 | Arg 111 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ala 19 | Gly 19 | conflict |
| Ala 28 | Lys 28 | conflict |
| Ser 33 | Tyr 33 | conflict |
| Arg 38 | Gln 38 | conflict |
| Lys 40 | Ser 40 | conflict |
| Thr 42 | Ala 42 | conflict |
| Gly 69 | Asp 69 | conflict |
| Ser 70 | Arg 70 | conflict |
| Asn 75 | Asp 75 | conflict |
| Glu 110 | Trp 110 | conflict |
| Gln 111 | Arg 111 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 49756.2 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 72.9 | |
| All* | Total formula weight | 49829.1 |






