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1TK5

T7 DNA polymerase binary complex with 8 oxo guanosine in the templating strand

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1P5'-D(*CP*GP*AP*AP*A*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*(DDG)P*TP*GP*CP*AP*A)-3'polymer226764.41
2T5'-D(*CP*CP*CP*(8OG)P*CP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3'polymer267939.11
3ADNA polymerasepolymer69879089.81UniProt (P00581)
Pfam (PF00476)
In PDB
Enterobacteria phage T7T7 DNA polymerase
4BThioredoxin 1polymer10811687.41UniProt (P0AA25)
Pfam (PF00085)
In PDB
Escherichia coliTRX1, TRX
5AMAGNESIUM IONnon-polymer24.31Chemie (MG)
6ASULFATE IONnon-polymer96.12Chemie (SO4)
7A2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.21Chemie (MES)
8APENTAETHYLENE GLYCOLnon-polymer238.31Chemie (1PE)
9waterwater18.0772Chemie (HOH)
Sequence modifications
A: 1 - 704 (UniProt: P00581)
PDBExternal DatabaseDetails
-Lys 118deletion
-Arg 119deletion
-Phe 120deletion
-Gly 121deletion
-Ser 122deletion
-His 123deletion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight105480.6
Non-Polymers*Number of molecules5
Total formula weight649.9
All*Total formula weight106130.6
*Water molecules are not included.

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PDB entries from 2024-09-18

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