Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0004527 | molecular_function | exonuclease activity |
A | 0004529 | molecular_function | DNA exonuclease activity |
A | 0005515 | molecular_function | protein binding |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0006302 | biological_process | double-strand break repair |
A | 0008408 | molecular_function | 3'-5' exonuclease activity |
A | 0039693 | biological_process | viral DNA genome replication |
A | 0046872 | molecular_function | metal ion binding |
A | 0090592 | biological_process | DNA synthesis involved in DNA replication |
B | 0005515 | molecular_function | protein binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0015035 | molecular_function | protein-disulfide reductase activity |
B | 0015036 | molecular_function | disulfide oxidoreductase activity |
B | 0030337 | molecular_function | DNA polymerase processivity factor activity |
B | 0045454 | biological_process | cell redox homeostasis |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 903 |
Chain | Residue |
A | ASP5 |
A | HOH1001 |
A | HOH1002 |
A | HOH1003 |
A | HOH1004 |
A | HOH1005 |
site_id | AC2 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 A 904 |
Chain | Residue |
A | HOH1216 |
A | HOH1345 |
A | HOH1349 |
A | HOH1369 |
A | HOH1581 |
A | LYS226 |
A | ARG229 |
A | HOH1039 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 905 |
Chain | Residue |
A | LYS184 |
A | ARG661 |
A | HOH1100 |
A | HOH1166 |
site_id | AC4 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE MES A 991 |
Chain | Residue |
A | LEU77 |
A | ASN78 |
A | ARG79 |
A | HOH1376 |
B | ILE5 |
B | SER11 |
B | THR14 |
B | ASP15 |
B | HOH1074 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE 1PE A 992 |
Chain | Residue |
A | ALA10 |
A | LEU11 |
A | TYR64 |
A | MET107 |
A | LYS136 |
A | TRP160 |
Functional Information from PROSITE/UniProt
site_id | PS00194 |
Number of Residues | 19 |
Details | THIOREDOXIN_1 Thioredoxin family active site. LVdFWaeWCGPCKmIapiL |
Chain | Residue | Details |
B | LEU24-LEU42 | |
site_id | PS00447 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_A DNA polymerase family A signature. RdnAKtfiYGflYgaGdekI |
Chain | Residue | Details |
A | ARG518-ILE537 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Nucleophile |
Chain | Residue | Details |
B | GLY33 | |
B | LYS36 | |
A | ALA180 | |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | SITE: Deprotonates C-terminal active site Cys |
Chain | Residue | Details |
B | PHE27 | |
A | ARG482 | |
A | CYS660 | |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | SITE: Contributes to redox potential value |
Chain | Residue | Details |
B | PRO34 | |
B | CYS35 | |
A | PHE528 | |
A | ALA532 | |
Chain | Residue | Details |
B | TYR70 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1mek |
Chain | Residue | Details |
B | PRO34 | |
B | CYS35 | |
B | CYS32 | |
B | GLY33 | |
site_id | CSA2 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1mek |
Chain | Residue | Details |
B | CYS35 | |
B | CYS32 | |