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9MYG
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BU of 9myg by Molmil
Cryo-EM structure of Natrinema sp. J7-2 Type IV pilus, PilA1
Descriptor: Archaeal Type IV pilin N-terminal domain-containing protein
Authors:Sonani, R.R, Egelman, E.H.
Deposit date:2025-01-21
Release date:2025-11-26
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A type IV pili-mediated mutualism between two co-resident temperate archaeal viruses and their host.
Cell Rep, 44, 2025
6IXY
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BU of 6ixy by Molmil
X-ray structure of major pilin from C. perfringens SM101
Descriptor: pilin
Authors:Kamitori, S, Tamai, E.
Deposit date:2018-12-12
Release date:2019-08-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Structures of major pilins in Clostridium perfringens demonstrate dynamic conformational change.
Acta Crystallogr D Struct Biol, 75, 2019
3GLD
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BU of 3gld by Molmil
Crystal Structure of the Major Pilin from Streptococcus pyogenes E117A mutant
Descriptor: Pilin
Authors:Kang, H.J, Baker, E.N.
Deposit date:2009-03-12
Release date:2009-06-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Intramolecular isopeptide bonds give thermodynamic and proteolytic stability to the major pilin protein of Streptococcus pyogenes
To be Published
3GLE
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BU of 3gle by Molmil
Crystal Structure of the Major Pilin from Streptococcus pyogenes N168A mutant
Descriptor: Pilin
Authors:Kang, H.J, Baker, E.N.
Deposit date:2009-03-12
Release date:2009-06-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Intramolecular isopeptide bonds give thermodynamic and proteolytic stability to the major pilin protein of Streptococcus pyogenes
To be Published
7JJC
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BU of 7jjc by Molmil
Crystal structure of neuropilin-1 b1 domain in complex with SARS-CoV-2 S1 C-end rule (CendR) peptide
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Neuropilin-1, ...
Authors:Chen, K.-E, Collins, B.M.
Deposit date:2020-07-25
Release date:2020-10-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Neuropilin-1 is a host factor for SARS-CoV-2 infection.
Science, 370, 2020
1KEX
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BU of 1kex by Molmil
Crystal Structure of the b1 Domain of Human Neuropilin-1
Descriptor: Neuropilin-1
Authors:Lee, C.C, Kreusch, A, McMullan, D, Ng, K, Spraggon, G.
Deposit date:2001-11-18
Release date:2003-01-28
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Human Neuropilin-1 b1 Domain
Structure, 11, 2003
5IYY
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BU of 5iyy by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-4 ligand.
Descriptor: Neuropilin-1, N~2~-[(benzyloxy)carbonyl]-L-arginine
Authors:Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
Deposit date:2016-03-24
Release date:2017-04-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
4GZ9
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BU of 4gz9 by Molmil
Mouse Neuropilin-1, extracellular domains 1-4 (a1a2b1b2)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y.
Deposit date:2012-09-06
Release date:2012-10-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Nat.Struct.Mol.Biol., 19, 2012
4GZA
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BU of 4gza by Molmil
Complex of mouse Plexin A2 - Semaphorin 3A - Neuropilin-1
Descriptor: CALCIUM ION, Neuropilin-1, Plexin-A2, ...
Authors:Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y.
Deposit date:2012-09-06
Release date:2012-10-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (7 Å)
Cite:Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Nat.Struct.Mol.Biol., 19, 2012
2QQN
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BU of 2qqn by Molmil
Neuropilin-1 b1 Domain in Complex with a VEGF-Blocking Fab
Descriptor: 1,2-ETHANEDIOL, Antibody heavy chain, Antibody light chain, ...
Authors:Appleton, B.A, Wiesmann, C.
Deposit date:2007-07-26
Release date:2007-11-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural studies of neuropilin/antibody complexes provide insights into semaphorin and VEGF binding
Embo J., 26, 2007
2QQK
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BU of 2qqk by Molmil
Neuropilin-2 a1a2b1b2 Domains in Complex with a Semaphorin-Blocking Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Heavy Chain, Antibody Light Chain, ...
Authors:Appleton, B.A, Wiesmann, C.
Deposit date:2007-07-26
Release date:2007-11-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural studies of neuropilin/antibody complexes provide insights into semaphorin and VEGF binding
Embo J., 26, 2007
2QQL
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BU of 2qql by Molmil
Neuropilin-2 a1a2b1b2 Domains in Complex with a Semaphorin-Blocking Fab
Descriptor: Antibody Heavy Chain, Antibody Light Chain, Neuropilin-2
Authors:Appleton, B.A, Wiesmann, C.
Deposit date:2007-07-26
Release date:2007-11-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural studies of neuropilin/antibody complexes provide insights into semaphorin and VEGF binding
Embo J., 26, 2007
4DEQ
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BU of 4deq by Molmil
Structure of the Neuropilin-1/VEGF-A complex
Descriptor: Neuropilin-1, Vascular endothelial growth factor A, PHOSPHATE ION
Authors:Vander Kooi, C.W.
Deposit date:2012-01-21
Release date:2012-02-08
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.649 Å)
Cite:Structural Basis for Selective Vascular Endothelial Growth Factor-A (VEGF-A) Binding to Neuropilin-1.
J.Biol.Chem., 287, 2012
2ORX
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BU of 2orx by Molmil
Structural Basis for Ligand Binding and Heparin Mediated Activation of Neuropilin
Descriptor: Neuropilin-1
Authors:Vander Kooi, C.W, Jusino, M.A, Perman, B, Neau, D.B, Bellamy, H.D, Leahy, D.J.
Deposit date:2007-02-05
Release date:2007-04-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for ligand and heparin binding to neuropilin B domains
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ORZ
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BU of 2orz by Molmil
Structural Basis for Ligand Binding and Heparin Mediated Activation of Neuropilin
Descriptor: Neuropilin-1, Tuftsin
Authors:Vander Kooi, C.W, Jusino, M.A, Perman, B, Neau, D.B, Bellamy, H.D, Leahy, D.J.
Deposit date:2007-02-05
Release date:2007-04-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for ligand and heparin binding to neuropilin B domains.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6M7C
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BU of 6m7c by Molmil
Crystal structure of C-terminal fragment of pilus adhesin SpaC from Lactobacillus rhamnosus GG
Descriptor: Pilus assembly protein
Authors:Kant, A, Palva, A, von Ossowski, I, Krishnan, V.
Deposit date:2020-03-18
Release date:2020-07-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Crystal structure of lactobacillar SpaC reveals an atypical five-domain pilus tip adhesin: Exposing its substrate-binding and assembly in SpaCBA pili.
J.Struct.Biol., 211, 2020
9EWX
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BU of 9ewx by Molmil
Cryo-EM structure of the Pseudomonas aeruginosa PAO1 Type IV pilus
Descriptor: Pilin
Authors:Ochner, H, Boehning, J, Wang, Z, Tarafder, A, Caspy, I, Bharat, T.A.M.
Deposit date:2024-04-05
Release date:2024-05-01
Last modified:2024-12-25
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Structure of the Pseudomonas aeruginosa PAO1 Type IV pilus.
Plos Pathog., 20, 2024
6GV9
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BU of 6gv9 by Molmil
Structure of the type IV pilus from enterohemorrhagic Escherichia coli (EHEC)
Descriptor: Prepilin peptidase-dependent protein D
Authors:Bardiaux, B, Amorim, G.C, Luna-Rico, A, Zheng, W, Guilvout, I, Jollivet, C, Nilges, M, Egelman, E, Francetic, O, Izadi-Pruneyre, N.
Deposit date:2018-06-20
Release date:2019-05-15
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Structure and Assembly of the Enterohemorrhagic Escherichia coli Type 4 Pilus.
Structure, 27, 2019
9P0A
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BU of 9p0a by Molmil
Structure of Natrinema sp. J7-2 Tafi pilus
Descriptor: Pilin
Authors:Sonani, R.R, Egelman, E.H.
Deposit date:2025-06-06
Release date:2025-07-23
Last modified:2025-11-19
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Tat-dependent bundling pilus of a halophilic archaeon assembles by a strand donation mechanism and facilitates biofilm formation.
Proc.Natl.Acad.Sci.USA, 122, 2025
5LER
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BU of 5ler by Molmil
Structure of the bacterial sex F pilus (13.2 Angstrom rise)
Descriptor: Pilin, [(2~{S})-3-[[(2~{R})-2,3-bis(oxidanyl)propoxy]-oxidanyl-phosphoryl]oxy-2-hexadec-9-enoyloxy-propyl] hexadecanoate
Authors:Costa, T.R.D, Ilangovan, I, Ukleja, M, Redzej, A, Santini, J.M, Smith, T.K, Egelman, E.H, Waksman, G.
Deposit date:2016-06-30
Release date:2016-11-02
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structure of the Bacterial Sex F Pilus Reveals an Assembly of a Stoichiometric Protein-Phospholipid Complex.
Cell, 166, 2016
5LFB
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BU of 5lfb by Molmil
Structure of the bacterial sex F pilus (12.5 Angstrom rise)
Descriptor: Pilin, [(2~{S})-3-[[(2~{R})-2,3-bis(oxidanyl)propoxy]-oxidanyl-phosphoryl]oxy-2-hexadec-9-enoyloxy-propyl] hexadecanoate
Authors:Costa, T.R.D, Ilangovan, I, Ukleja, M, Redzej, A, Santini, J.M, Smith, T.K, Egelman, E.H, Waksman, G.
Deposit date:2016-06-30
Release date:2016-11-02
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structure of the Bacterial Sex F Pilus Reveals an Assembly of a Stoichiometric Protein-Phospholipid Complex.
Cell, 166, 2016
6W8X
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BU of 6w8x by Molmil
Cryo-EM of the S. solfataricus pilus
Descriptor: pilin
Authors:Wang, F, Baquero, D.P, Su, Z, Beltran, L.C, Prangishvili, D, Krupovic, M, Egelman, E.H.
Deposit date:2020-03-21
Release date:2020-07-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The structures of two archaeal type IV pili illuminate evolutionary relationships.
Nat Commun, 11, 2020
6QVF
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BU of 6qvf by Molmil
TT_C0855 competence pilin from Thermus thermophilus HB27
Descriptor: Prepilin-like protein
Authors:Derrick, J.P, Salleh, M.Z, Levy, C.
Deposit date:2019-03-01
Release date:2019-05-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structure and Properties of a Natural Competence-Associated Pilin Suggest a Unique Pilus Tip-Associated DNA Receptor.
Mbio, 10, 2019
6W8U
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BU of 6w8u by Molmil
Cryo-EM of the Pyrobaculum arsenaticum pilus
Descriptor: pilin
Authors:Wang, F, Baquero, D.P, Su, Z, Beltran, L.C, Prangishvili, D, Krupovic, M, Egelman, E.H.
Deposit date:2020-03-21
Release date:2020-07-08
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The structures of two archaeal type IV pili illuminate evolutionary relationships.
Nat Commun, 11, 2020
2XG4
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BU of 2xg4 by Molmil
E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 2c
Descriptor: (3R)-8-CYCLOPROPYL-6-(MORPHOLIN-4-YLMETHYL)-7-(1-NAPHTHYLMETHYL)-5-OXO-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD, COBALT (II) ION, ...
Authors:Remaut, H, Phan, G, Buelens, F, Chorell, E, Pinkner, J.S, Edvinsson, S, Almqvist, F, Hultgren, S.J, Waksman, G.
Deposit date:2010-05-30
Release date:2010-07-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design and Synthesis of C-2 Substituted Thiazolo and Dihydrothiazolo Ring-Fused 2-Pyridones: Pilicides with Increased Antivirulence Activity.
J.Med.Chem., 53, 2010

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