2JMJ | | NMR SOLUTION STRUCTURE OF THE PHD DOMAIN FROM THE YEAST YNG1 PROTEIN IN COMPLEX WITH H3(1-9)K4ME3 PEPTIDE | | Descriptor: | Protein YNG1, Histone H3, ZINC ION | | Authors: | Ilin, S., Taverna, S.D., Rogers, R.S., Tanny, J.C., Lavender, H., Li, H., Baker, L., Boyle, J., Blair, L.P., Chait, B.T., Patel, D.J., Aitchison, J.D., Tackett, A.J., Allis, C.D. | | Deposit date: | 2006-11-15 | | Release date: | 2007-07-03 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
Mol.Cell, 24, 2006
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1KNA | |
1KNE | |
5ZBA | | CRYSTAL STRUCTURE OF RTT109-ASF1-H3-H4-COA COMPLEX | | Descriptor: | DNA damage response protein Rtt109, putative, Histone chaperone asf1, ... | | Authors: | Zhang, L., Serra-Cardona, A., Zhou, H., Wang, M., Yang, N., Zhang, Z., Xu, R.M. | | Deposit date: | 2018-02-10 | | Release date: | 2018-07-25 | | Last modified: | 2018-08-22 | | Method: | X-RAY DIFFRACTION (3.5 Å) | | Cite: | Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109.
Cell, 174, 2018
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5ZBB | | CRYSTAL STRUCTURE OF RTT109-ASF1-H3-H4 COMPLEX | | Descriptor: | DNA damage response protein Rtt109, putative, Histone chaperone asf1, ... | | Authors: | Zhang, L., Serra-Cardona, A., Zhou, H., Wang, M., Yang, N., Zhang, Z., Xu, R.M. | | Deposit date: | 2018-02-10 | | Release date: | 2018-07-25 | | Last modified: | 2018-08-22 | | Method: | X-RAY DIFFRACTION (3.6 Å) | | Cite: | Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109.
Cell, 174, 2018
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2IDC | | STRUCTURE OF THE HISTONE H3-ASF1 CHAPERONE INTERACTION | | Descriptor: | ANTI-SILENCING PROTEIN 1 AND HISTONE H3 CHIMERA | | Authors: | Antczak, A.J., Tsubota, T., Kaufman, P.D., Berger, J.M. | | Deposit date: | 2006-09-14 | | Release date: | 2007-01-30 | | Last modified: | 2017-06-14 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Structure of the yeast histone H3-ASF1 interaction: implications for chaperone mechanism, species-specific interactions, and epigenetics.
Bmc Struct.Biol., 6, 2006
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1PFB | | STRUCTURAL BASIS FOR SPECIFIC BINDING OF POLYCOMB CHROMODOMAIN TO HISTONE H3 METHYLATED AT K27 | | Descriptor: | Polycomb protein, Histone H3, embryonic, ... | | Authors: | Min, J.R., Zhang, Y., Xu, R.-M. | | Deposit date: | 2003-05-24 | | Release date: | 2003-10-07 | | Last modified: | 2017-10-11 | | Method: | X-RAY DIFFRACTION (1.4 Å) | | Cite: | Structural basis for specific binding of Polycomb chromodomain to histone H3 methylated at Lys 27.
Genes Dev., 17, 2003
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1QSN | | CRYSTAL STRUCTURE OF TETRAHYMENA GCN5 WITH BOUND COENZYME A AND HISTONE H3 PEPTIDE | | Descriptor: | TGCN5 HISTONE ACETYL TRANSFERASE, HISTONE H3, COENZYME A | | Authors: | Rojas, J.R., Trievel, R.C., Zhou, J., Mo, Y., Li, X., Berger, S.L., David Allis, C., Marmorstein, R. | | Deposit date: | 1999-06-22 | | Release date: | 1999-09-08 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Structure of Tetrahymena GCN5 bound to coenzyme A and a histone H3 peptide.
Nature, 401, 1999
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5EJ0 | | THE VACCINIA VIRUS H3 ENVELOPE PROTEIN, A MAJOR TARGET OF NEUTRALIZING ANTIBODIES, EXHIBITS A GLYCOSYLTRANSFERASE FOLD AND BINDS UDP-GLUCOSE | | Descriptor: | Envelope protein H3, 2-AMINO-ETHANETHIOL, 2-(2-METHOXYETHOXY)ETHANOL, ... | | Authors: | Singh, K., Gittis, A.G., Gitti, R.K., Ostazesky, S.A., Su, H.P., Garboczi, D.N. | | Deposit date: | 2015-10-30 | | Release date: | 2016-03-16 | | Last modified: | 2016-05-11 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | The Vaccinia Virus H3 Envelope Protein, a Major Target of Neutralizing Antibodies, Exhibits a Glycosyltransferase Fold and Binds UDP-Glucose.
J.Virol., 90, 2016
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5VE8 | | CRYSTAL STRUCTURE OF FULL-LENGTH KLUYVEROMYCES LACTIS KAP123 WITH HISTONE H3 1-28 | | Descriptor: | Kap123, Histone H3 | | Authors: | An, S., Yoon, J., Song, J.-J., Cho, U.-S. | | Deposit date: | 2017-04-04 | | Release date: | 2017-11-01 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | Structure-based nuclear import mechanism of histones H3 and H4 mediated by Kap123.
Elife, 6, 2017
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5AY8 | | CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CONTAINING H3.Y | | Descriptor: | H3.Y, Histone H4, Histone H2A type 1-B/E, ... | | Authors: | Kujirai, T., Horikoshi, N., Sato, K., Maehara, K., Machida, S., Osakabe, A., Kimura, H., Ohkawa, Y., Kurumizaka, H. | | Deposit date: | 2015-08-10 | | Release date: | 2016-04-06 | | Last modified: | 2016-08-10 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Structure and function of human histone H3.Y nucleosome
Nucleic Acids Res., 44, 2016
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3ZVY | | PHD FINGER OF HUMAN UHRF1 IN COMPLEX WITH UNMODIFIED HISTONE H3 N- TERMINAL TAIL | | Descriptor: | E3 UBIQUITIN-PROTEIN LIGASE UHRF1, HISTONE H3.1, ZINC ION, ... | | Authors: | Lallous, N., Birck, C., Mc Ewen, A.G., Legrand, P., Samama, J.P. | | Deposit date: | 2011-07-28 | | Release date: | 2011-12-07 | | Last modified: | 2019-05-08 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | The Phd Finger of Human Uhrf1 Reveals a New Subgroup of Unmethylated Histone H3 Tail Readers.
Plos One, 6, 2011
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4LK9 | | CRYSTAL STRUCTURE OF MOZ DOUBLE PHD FINGER HISTONE H3 TAIL COMPLEX | | Descriptor: | Histone acetyltransferase KAT6A, Histone H3.1, ZINC ION | | Authors: | Dreveny, I., Deeves, S.E., Yue, B., Heery, D.M. | | Deposit date: | 2013-07-07 | | Release date: | 2013-10-16 | | Last modified: | 2014-02-05 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | The double PHD finger domain of MOZ/MYST3 induces alpha-helical structure of the histone H3 tail to facilitate acetylation and methylation sampling and modification.
Nucleic Acids Res., 42, 2014
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5WVO | | CRYSTAL STRUCTURE OF DNMT1 RFTS DOMAIN IN COMPLEX WITH K18/K23 MONO-UBIQUITYLATED HISTONE H3 | | Descriptor: | Ubiquitin, DNA (cytosine-5)-methyltransferase 1, Histone H3.1, ... | | Authors: | Ishiyama, S., Nishiyama, A., Nakanishi, M., Arita, K. | | Deposit date: | 2016-12-28 | | Release date: | 2017-11-15 | | Method: | X-RAY DIFFRACTION (1.997 Å) | | Cite: | Structure of the Dnmt1 Reader Module Complexed with a Unique Two-Mono-Ubiquitin Mark on Histone H3 Reveals the Basis for DNA Methylation Maintenance
Mol. Cell, 68, 2017
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2V1D | | STRUCTURAL BASIS OF LSD1-COREST SELECTIVITY IN HISTONE H3 RECOGNITION | | Descriptor: | LYSINE-SPECIFIC HISTONE DEMETHYLASE 1, REST COREPRESSOR 1, HISTONE H3.1T, ... | | Authors: | Forneris, F., Binda, C., Adamo, A., Battaglioli, E., Mattevi, A. | | Deposit date: | 2007-05-23 | | Release date: | 2007-05-29 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Structural Basis of Lsd1-Corest Selectivity in Histone H3 Recognition.
J.Biol.Chem., 282, 2007
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5C3I | | CRYSTAL STRUCTURE OF THE QUATERNARY COMPLEX OF HISTONE H3-H4 HETERODIMER WITH CHAPERONE ASF1 AND THE REPLICATIVE HELICASE SUBUNIT MCM2 | | Descriptor: | Histone chaperone ASF1A, Histone H3.1, Histone H4, ... | | Authors: | Wang, H., Wang, M., Yang, N., Xu, R.M. | | Deposit date: | 2015-06-17 | | Release date: | 2015-07-29 | | Last modified: | 2017-10-18 | | Method: | X-RAY DIFFRACTION (3.5 Å) | | Cite: | Structure of the quaternary complex of histone H3-H4 heterodimer with chaperone ASF1 and the replicative helicase subunit MCM2
Protein Cell, 6, 2015
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5GXQ | | THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING H3.6 | | Descriptor: | Histone H3.6, Histone H4, Histone H2A type 1-B/E, ... | | Authors: | Taguchi, H., Xie, Y., Horikoshi, N., Kurumizaka, H. | | Deposit date: | 2016-09-19 | | Release date: | 2017-04-19 | | Last modified: | 2017-10-18 | | Method: | X-RAY DIFFRACTION (2.85 Å) | | Cite: | Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8
Biochemistry, 56, 2017
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5T8R | | CRYSTAL STRUCTURE OF HUMAN BAZ2A PHD ZINC FINGER IN COMPLEX WITH UNMODIFIED H3 10-MER | | Descriptor: | Bromodomain adjacent to zinc finger domain protein 2A, Histone H3.1, ZINC ION, ... | | Authors: | Amato, A., Gadd, M.S., Bortoluzzi, A., Ciulli, A. | | Deposit date: | 2016-09-08 | | Release date: | 2017-04-05 | | Last modified: | 2017-05-17 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Structural basis of molecular recognition of helical histone H3 tail by PHD finger domains.
Biochem. J., 474, 2017
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5VA6 | | CRYSTAL STRUCTURE OF ATXR5 IN COMPLEX WITH HISTONE H3.1 MONO-METHYLATED ON R26 | | Descriptor: | Probable Histone-lysine N-methyltransferase ATXR5, Histone H3.1, S-ADENOSYL-L-HOMOCYSTEINE | | Authors: | Bergamin, E., Sarvan, S., Malette, J., Eram, M., Yeung, S., Mongeon, V., Joshi, M., Brunzelle, J.S., Michaels, S.D., Blais, A., Vedadi, M., Couture, J.-F. | | Deposit date: | 2017-03-24 | | Release date: | 2017-04-19 | | Last modified: | 2017-09-20 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Molecular basis for the methylation specificity of ATXR5 for histone H3.
Nucleic Acids Res., 45, 2017
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5X7X | | THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING H3.3 AT 2.18 ANGSTROM RESOLUTION | | Descriptor: | Histone H3.3, Histone H4, Histone H2A type 1-B/E, ... | | Authors: | Arimura, Y., Taguchi, H., Kurumizaka, H. | | Deposit date: | 2017-02-27 | | Release date: | 2017-04-19 | | Last modified: | 2017-10-18 | | Method: | X-RAY DIFFRACTION (2.184 Å) | | Cite: | Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8
Biochemistry, 56, 2017
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2B2T | | TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 4 AND PHOSPHOTHREONINE 3 | | Descriptor: | Chromodomain-helicase-DNA-binding protein 1, Histone H3 tail | | Authors: | Flanagan IV, J.F., Mi, L.-Z., Chruszcz, M., Cymborowski, M., Clines, K.L., Kim, Y., Minor, W., Rastinejad, F., Khorasanizadeh, S. | | Deposit date: | 2005-09-19 | | Release date: | 2005-12-27 | | Last modified: | 2017-10-11 | | Method: | X-RAY DIFFRACTION (2.45 Å) | | Cite: | Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
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2B2U | | TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 4 AND DIMETHYLARGININE 2 | | Descriptor: | Chromodomain-helicase-DNA-binding protein 1, Histone H3 | | Authors: | Flanagan IV, J.F., Mi, L.-Z., Chruszcz, M., Cymborowski, M., Clines, K.L., Kim, Y., Minor, W., Rastinejad, F., Khorasanizadeh, S. | | Deposit date: | 2005-09-19 | | Release date: | 2005-12-27 | | Last modified: | 2017-10-11 | | Method: | X-RAY DIFFRACTION (2.95 Å) | | Cite: | Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
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2B2V | | CRYSTAL STRUCTURE ANALYSIS OF HUMAN CHD1 CHROMODOMAINS 1 AND 2 BOUND TO HISTONE H3 RESI 1-15 MEK4 | | Descriptor: | Chromodomain-helicase-DNA-binding protein 1, Histone H3 | | Authors: | Flanagan IV, J.F., Mi, L.-Z., Chruszcz, M., Cymborowski, M., Clines, K.L., Kim, Y., Minor, W., Rastinejad, F., Khorasanizadeh, S. | | Deposit date: | 2005-09-19 | | Release date: | 2005-12-27 | | Last modified: | 2017-10-11 | | Method: | X-RAY DIFFRACTION (2.65 Å) | | Cite: | Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
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2B2W | | TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 4 | | Descriptor: | Chromodomain-helicase-DNA-binding protein 1, Histone H3 | | Authors: | Flanagan IV, J.F., Mi, L.-Z., Chruszcz, M., Cymborowski, M., Clines, K.L., Kim, Y., Minor, W., Rastinejad, F., Khorasanizadeh, S. | | Deposit date: | 2005-09-19 | | Release date: | 2005-12-27 | | Last modified: | 2017-10-11 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
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2H6Q | | HISTONE H3 RECOGNITION AND PRESENTATION BY THE WDR5 MODULE OF THE MLL1 COMPLEX | | Descriptor: | WD-repeat protein 5, Histone H3 K4-Me3 9-residue peptide | | Authors: | Ruthenburg, A.J., Wang, W.-K., Graybosch, D.M., Li, H., Allis, C.D., Patel, D.J., Verdine, G.L. | | Deposit date: | 2006-06-01 | | Release date: | 2006-07-04 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.87 Å) | | Cite: | Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Nat.Struct.Mol.Biol., 13, 2006
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