2JMJ
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NMR SOLUTION STRUCTURE OF THE PHD DOMAIN FROM THE YEAST YNG1 PROTEIN IN COMPLEX WITH H3(1-9)K4ME3 PEPTIDE
Descriptor:Protein YNG1, Histone H3, ZINC ION
Authors:Ilin, S., Taverna, S.D., Rogers, R.S., Tanny, J.C., Lavender, H., Li, H., Baker, L., Boyle, J., Blair, L.P., Chait, B.T., Patel, D.J., Aitchison, J.D., Tackett, A.J., Allis, C.D.
Deposit date:2006-11-15
Release date:2007-07-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
Mol.Cell, 24, 2006
1KNA
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CHROMO DOMAIN OF HP1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING DIMETHYLLYSINE 9.
Descriptor:HETEROCHROMATIN PROTEIN 1, METHYLATED Histone H3
Authors:Jacobs, S.A., Khorasanizadeh, S.
Deposit date:2001-12-18
Release date:2002-03-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail.
Science, 295, 2002
1KNE
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CHROMO DOMAIN OF HP1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 9
Descriptor:HETEROCHROMATIN PROTEIN 1, Trimethylated Histone H3
Authors:Jacobs, S.A., Khorasanizadeh, S.
Deposit date:2001-12-18
Release date:2002-03-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail.
Science, 295, 2002
5ZBA
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CRYSTAL STRUCTURE OF RTT109-ASF1-H3-H4-COA COMPLEX
Descriptor:DNA damage response protein Rtt109, putative, Histone chaperone asf1, ...
Authors:Zhang, L., Serra-Cardona, A., Zhou, H., Wang, M., Yang, N., Zhang, Z., Xu, R.M.
Deposit date:2018-02-10
Release date:2018-07-25
Last modified:2018-08-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109.
Cell, 174, 2018
5ZBB
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CRYSTAL STRUCTURE OF RTT109-ASF1-H3-H4 COMPLEX
Descriptor:DNA damage response protein Rtt109, putative, Histone chaperone asf1, ...
Authors:Zhang, L., Serra-Cardona, A., Zhou, H., Wang, M., Yang, N., Zhang, Z., Xu, R.M.
Deposit date:2018-02-10
Release date:2018-07-25
Last modified:2018-08-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109.
Cell, 174, 2018
2IDC
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STRUCTURE OF THE HISTONE H3-ASF1 CHAPERONE INTERACTION
Descriptor:ANTI-SILENCING PROTEIN 1 AND HISTONE H3 CHIMERA
Authors:Antczak, A.J., Tsubota, T., Kaufman, P.D., Berger, J.M.
Deposit date:2006-09-14
Release date:2007-01-30
Last modified:2017-06-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the yeast histone H3-ASF1 interaction: implications for chaperone mechanism, species-specific interactions, and epigenetics.
Bmc Struct.Biol., 6, 2006
1PFB
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STRUCTURAL BASIS FOR SPECIFIC BINDING OF POLYCOMB CHROMODOMAIN TO HISTONE H3 METHYLATED AT K27
Descriptor:Polycomb protein, Histone H3, embryonic, ...
Authors:Min, J.R., Zhang, Y., Xu, R.-M.
Deposit date:2003-05-24
Release date:2003-10-07
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis for specific binding of Polycomb chromodomain to histone H3 methylated at Lys 27.
Genes Dev., 17, 2003
1QSN
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CRYSTAL STRUCTURE OF TETRAHYMENA GCN5 WITH BOUND COENZYME A AND HISTONE H3 PEPTIDE
Descriptor:TGCN5 HISTONE ACETYL TRANSFERASE, HISTONE H3, COENZYME A
Authors:Rojas, J.R., Trievel, R.C., Zhou, J., Mo, Y., Li, X., Berger, S.L., David Allis, C., Marmorstein, R.
Deposit date:1999-06-22
Release date:1999-09-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Tetrahymena GCN5 bound to coenzyme A and a histone H3 peptide.
Nature, 401, 1999
5EJ0
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THE VACCINIA VIRUS H3 ENVELOPE PROTEIN, A MAJOR TARGET OF NEUTRALIZING ANTIBODIES, EXHIBITS A GLYCOSYLTRANSFERASE FOLD AND BINDS UDP-GLUCOSE
Descriptor:Envelope protein H3, 2-AMINO-ETHANETHIOL, 2-(2-METHOXYETHOXY)ETHANOL, ...
Authors:Singh, K., Gittis, A.G., Gitti, R.K., Ostazesky, S.A., Su, H.P., Garboczi, D.N.
Deposit date:2015-10-30
Release date:2016-03-16
Last modified:2016-05-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Vaccinia Virus H3 Envelope Protein, a Major Target of Neutralizing Antibodies, Exhibits a Glycosyltransferase Fold and Binds UDP-Glucose.
J.Virol., 90, 2016
5VE8
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CRYSTAL STRUCTURE OF FULL-LENGTH KLUYVEROMYCES LACTIS KAP123 WITH HISTONE H3 1-28
Descriptor:Kap123, Histone H3
Authors:An, S., Yoon, J., Song, J.-J., Cho, U.-S.
Deposit date:2017-04-04
Release date:2017-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-based nuclear import mechanism of histones H3 and H4 mediated by Kap123.
Elife, 6, 2017
5AY8
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CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CONTAINING H3.Y
Descriptor:H3.Y, Histone H4, Histone H2A type 1-B/E, ...
Authors:Kujirai, T., Horikoshi, N., Sato, K., Maehara, K., Machida, S., Osakabe, A., Kimura, H., Ohkawa, Y., Kurumizaka, H.
Deposit date:2015-08-10
Release date:2016-04-06
Last modified:2016-08-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of human histone H3.Y nucleosome
Nucleic Acids Res., 44, 2016
4LK9
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CRYSTAL STRUCTURE OF MOZ DOUBLE PHD FINGER HISTONE H3 TAIL COMPLEX
Descriptor:Histone acetyltransferase KAT6A, Histone H3.1, ZINC ION
Authors:Dreveny, I., Deeves, S.E., Yue, B., Heery, D.M.
Deposit date:2013-07-07
Release date:2013-10-16
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The double PHD finger domain of MOZ/MYST3 induces alpha-helical structure of the histone H3 tail to facilitate acetylation and methylation sampling and modification.
Nucleic Acids Res., 42, 2014
3ZVY
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PHD FINGER OF HUMAN UHRF1 IN COMPLEX WITH UNMODIFIED HISTONE H3 N- TERMINAL TAIL
Descriptor:E3 UBIQUITIN-PROTEIN LIGASE UHRF1, HISTONE H3.1, ZINC ION, ...
Authors:Lallous, N., Birck, C., Mc Ewen, A.G., Legrand, P., Samama, J.P.
Deposit date:2011-07-28
Release date:2011-12-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Phd Finger of Human Uhrf1 Reveals a New Subgroup of Unmethylated Histone H3 Tail Readers.
Plos One, 6, 2011
5WVO
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CRYSTAL STRUCTURE OF DNMT1 RFTS DOMAIN IN COMPLEX WITH K18/K23 MONO-UBIQUITYLATED HISTONE H3
Descriptor:Ubiquitin, DNA (cytosine-5)-methyltransferase 1, Histone H3.1, ...
Authors:Ishiyama, S., Nishiyama, A., Nakanishi, M., Arita, K.
Deposit date:2016-12-28
Release date:2017-11-15
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Structure of the Dnmt1 Reader Module Complexed with a Unique Two-Mono-Ubiquitin Mark on Histone H3 Reveals the Basis for DNA Methylation Maintenance
Mol. Cell, 68, 2017
5C3I
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CRYSTAL STRUCTURE OF THE QUATERNARY COMPLEX OF HISTONE H3-H4 HETERODIMER WITH CHAPERONE ASF1 AND THE REPLICATIVE HELICASE SUBUNIT MCM2
Descriptor:Histone chaperone ASF1A, Histone H3.1, Histone H4, ...
Authors:Wang, H., Wang, M., Yang, N., Xu, R.M.
Deposit date:2015-06-17
Release date:2015-07-29
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the quaternary complex of histone H3-H4 heterodimer with chaperone ASF1 and the replicative helicase subunit MCM2
Protein Cell, 6, 2015
5GXQ
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THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING H3.6
Descriptor:Histone H3.6, Histone H4, Histone H2A type 1-B/E, ...
Authors:Taguchi, H., Xie, Y., Horikoshi, N., Kurumizaka, H.
Deposit date:2016-09-19
Release date:2017-04-19
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8
Biochemistry, 56, 2017
5T8R
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CRYSTAL STRUCTURE OF HUMAN BAZ2A PHD ZINC FINGER IN COMPLEX WITH UNMODIFIED H3 10-MER
Descriptor:Bromodomain adjacent to zinc finger domain protein 2A, Histone H3.1, ZINC ION, ...
Authors:Amato, A., Gadd, M.S., Bortoluzzi, A., Ciulli, A.
Deposit date:2016-09-08
Release date:2017-04-05
Last modified:2017-05-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of molecular recognition of helical histone H3 tail by PHD finger domains.
Biochem. J., 474, 2017
5VA6
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CRYSTAL STRUCTURE OF ATXR5 IN COMPLEX WITH HISTONE H3.1 MONO-METHYLATED ON R26
Descriptor:Probable Histone-lysine N-methyltransferase ATXR5, Histone H3.1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Bergamin, E., Sarvan, S., Malette, J., Eram, M., Yeung, S., Mongeon, V., Joshi, M., Brunzelle, J.S., Michaels, S.D., Blais, A., Vedadi, M., Couture, J.-F.
Deposit date:2017-03-24
Release date:2017-04-19
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis for the methylation specificity of ATXR5 for histone H3.
Nucleic Acids Res., 45, 2017
5X7X
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THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING H3.3 AT 2.18 ANGSTROM RESOLUTION
Descriptor:Histone H3.3, Histone H4, Histone H2A type 1-B/E, ...
Authors:Arimura, Y., Taguchi, H., Kurumizaka, H.
Deposit date:2017-02-27
Release date:2017-04-19
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.184 Å)
Cite:Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8
Biochemistry, 56, 2017
2B2T
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TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 4 AND PHOSPHOTHREONINE 3
Descriptor:Chromodomain-helicase-DNA-binding protein 1, Histone H3 tail
Authors:Flanagan IV, J.F., Mi, L.-Z., Chruszcz, M., Cymborowski, M., Clines, K.L., Kim, Y., Minor, W., Rastinejad, F., Khorasanizadeh, S.
Deposit date:2005-09-19
Release date:2005-12-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
2B2U
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TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 4 AND DIMETHYLARGININE 2
Descriptor:Chromodomain-helicase-DNA-binding protein 1, Histone H3
Authors:Flanagan IV, J.F., Mi, L.-Z., Chruszcz, M., Cymborowski, M., Clines, K.L., Kim, Y., Minor, W., Rastinejad, F., Khorasanizadeh, S.
Deposit date:2005-09-19
Release date:2005-12-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
2B2V
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CRYSTAL STRUCTURE ANALYSIS OF HUMAN CHD1 CHROMODOMAINS 1 AND 2 BOUND TO HISTONE H3 RESI 1-15 MEK4
Descriptor:Chromodomain-helicase-DNA-binding protein 1, Histone H3
Authors:Flanagan IV, J.F., Mi, L.-Z., Chruszcz, M., Cymborowski, M., Clines, K.L., Kim, Y., Minor, W., Rastinejad, F., Khorasanizadeh, S.
Deposit date:2005-09-19
Release date:2005-12-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
2B2W
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TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 4
Descriptor:Chromodomain-helicase-DNA-binding protein 1, Histone H3
Authors:Flanagan IV, J.F., Mi, L.-Z., Chruszcz, M., Cymborowski, M., Clines, K.L., Kim, Y., Minor, W., Rastinejad, F., Khorasanizadeh, S.
Deposit date:2005-09-19
Release date:2005-12-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
2H6Q
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HISTONE H3 RECOGNITION AND PRESENTATION BY THE WDR5 MODULE OF THE MLL1 COMPLEX
Descriptor:WD-repeat protein 5, Histone H3 K4-Me3 9-residue peptide
Authors:Ruthenburg, A.J., Wang, W.-K., Graybosch, D.M., Li, H., Allis, C.D., Patel, D.J., Verdine, G.L.
Deposit date:2006-06-01
Release date:2006-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Nat.Struct.Mol.Biol., 13, 2006
2V1D
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STRUCTURAL BASIS OF LSD1-COREST SELECTIVITY IN HISTONE H3 RECOGNITION
Descriptor:LYSINE-SPECIFIC HISTONE DEMETHYLASE 1, REST COREPRESSOR 1, HISTONE H3.1T, ...
Authors:Forneris, F., Binda, C., Adamo, A., Battaglioli, E., Mattevi, A.
Deposit date:2007-05-23
Release date:2007-05-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis of Lsd1-Corest Selectivity in Histone H3 Recognition.
J.Biol.Chem., 282, 2007
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