2OCE
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1Q46
| crystal structure of the eIF2 alpha subunit from saccharomyces cerevisia | Descriptor: | translation initiation factor 2 alpha subunit | Authors: | Dhaliwal, S, Hoffman, D.W. | Deposit date: | 2003-08-01 | Release date: | 2003-10-28 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.86 Å) | Cite: | The crystal structure of the N-terminal region of the alpha subunit of translation initiation factor 2 (eIF2alpha) from Saccharomyces cerevisiae provides a view of the loop containing serine 51, the target of the eIF2alpha-specific kinases. J.Mol.Biol., 334, 2003
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1Q8K
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2VMK
| Crystal Structure of E. coli RNase E Apoprotein - Catalytic Domain | Descriptor: | RIBONUCLEASE E, SULFATE ION, ZINC ION | Authors: | Koslover, D.J, Callaghan, A.J, Marcaida, M.J, Martick, M, Scott, W.G, Luisi, B.F. | Deposit date: | 2008-01-28 | Release date: | 2008-07-22 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | The Crystal Structure of the Escherichia Coli Rnase E Apoprotein and a Mechanism for RNA Degradation. Structure, 16, 2008
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2VRT
| Crystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic Domain | Descriptor: | 5'-R(*UP*UP)-3', 5'-R(*UP*UP*GP)-3', RIBONUCLEASE E, ... | Authors: | Koslover, D.J, Callaghan, A.J, Marcaida, M.J, Garman, E.F, Martick, M, Scott, W.G, Luisi, B.F. | Deposit date: | 2008-04-14 | Release date: | 2008-07-22 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (3.5 Å) | Cite: | The Crystal Structure of the Escherichia Coli Rnase E Apoprotein and a Mechanism for RNA Degradation. Structure, 16, 2008
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3BZC
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3BZK
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4MTN
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1Y14
| Crystal structure of yeast subcomplex of Rpb4 and Rpb7 | Descriptor: | DNA-directed RNA polymerase II 19 kDa polypeptide, DNA-directed RNA polymerase II 32 kDa polypeptide | Authors: | Armache, K.-J, Mitterweger, S, Meinhart, A, Cramer, P. | Deposit date: | 2004-11-17 | Release date: | 2004-12-14 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structures of Complete RNA Polymerase II and Its Subcomplex, Rpb4/7 J.Biol.Chem., 280, 2005
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5F6C
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2IX1
| RNase II D209N mutant | Descriptor: | 5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP *AP*AP*A)-3', EXORIBONUCLEASE 2, MAGNESIUM ION | Authors: | Frazao, C, McVey, C.E, Amblar, M, Barbas, A, Vonrhein, C, Arraiano, C.M, Carrondo, M.A. | Deposit date: | 2006-07-05 | Release date: | 2006-10-05 | Last modified: | 2019-07-24 | Method: | X-RAY DIFFRACTION (2.74 Å) | Cite: | Unravelling the Dynamics of RNA Degradation by Ribonuclease II and its RNA-Bound Complex Nature, 443, 2006
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2ID0
| Escherichia coli RNase II | Descriptor: | Exoribonuclease 2, MANGANESE (II) ION | Authors: | Zuo, Y, Zhang, J, Wang, Y, Malhotra, A. | Deposit date: | 2006-09-13 | Release date: | 2006-10-03 | Last modified: | 2017-10-18 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Structural Basis for Processivity and Single-Strand Specificity of RNase II. Mol.Cell, 24, 2006
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2IX0
| RNase II | Descriptor: | CALCIUM ION, CYTIDINE-5'-MONOPHOSPHATE, EXORIBONUCLEASE 2, ... | Authors: | Frazao, C, Mcvey, C.E, Amblar, M, Barbas, A, Vonrhein, C, Arraiano, C.M, Carrondo, M.A. | Deposit date: | 2006-07-05 | Release date: | 2006-10-05 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.44 Å) | Cite: | Unravelling the Dynamics of RNA Degradation by Ribonuclease II and its RNA-Bound Complex Nature, 7, 2006
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1YZ6
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2BX2
| Catalytic domain of E. coli RNase E | Descriptor: | MAGNESIUM ION, RIBONUCLEASE E, RNA (5'-R(*UP*UP*UP*AP*CP*AP*GP*UP*AP*UP*UP* UP*GP*UP*U)-3'), ... | Authors: | Marcaida, M.J, Callaghan, A.J, Scott, W.G, Luisi, B.F. | Deposit date: | 2005-07-21 | Release date: | 2005-10-14 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.85 Å) | Cite: | Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover Nature, 437, 2005
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2C4R
| Catalytic domain of E. coli RNase E | Descriptor: | MAGNESIUM ION, RIBONUCLEASE E, SSRNA MOLECULE: 5'-R(*AP*CP*AP*GP*UP*AP*UP*UP*UP*GP)-3', ... | Authors: | Marcaida, M.J, Callaghan, A.J, Luisi, B.F. | Deposit date: | 2005-10-21 | Release date: | 2005-10-25 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (3.6 Å) | Cite: | Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover Nature, 437, 2005
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2C0B
| Catalytic domain of E. coli RNase E in complex with 13-mer RNA | Descriptor: | 5'-R(*UP*UP*UP*AP*CP*AP*GP*UP*AP*UP*UP*UP*G)-3', MAGNESIUM ION, RIBONUCLEASE E, ... | Authors: | Marcaida, M.J, Callaghan, A.J, Scott, W.G, Luisi, B.F. | Deposit date: | 2005-08-30 | Release date: | 2005-10-14 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (3.18 Å) | Cite: | Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover Nature, 437, 2005
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2C35
| Subunits Rpb4 and Rpb7 of human RNA polymerase II | Descriptor: | DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 19 KDA POLYPEPTIDE | Authors: | Meka, H, Werner, F, Cordell, S.C, Onesti, S, Brick, P. | Deposit date: | 2005-10-04 | Release date: | 2005-11-18 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Crystal Structure and RNA Binding of the Rpb4/Rpb7 Subunits of Human RNA Polymerase II. Nucleic Acids Res., 33, 2005
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6G63
| RNase E in complex with sRNA RrpA | Descriptor: | RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), Ribonuclease E, URIDINE-5'-MONOPHOSPHATE, ... | Authors: | Bandyra, K.B, Luisi, B.F. | Deposit date: | 2018-03-31 | Release date: | 2018-10-03 | Last modified: | 2018-10-31 | Method: | X-RAY DIFFRACTION (3.95 Å) | Cite: | Substrate Recognition and Autoinhibition in the Central Ribonuclease RNase E. Mol. Cell, 72, 2018
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8B0J
| CryoEM structure of bacterial RNaseE.RapZ.GlmZ complex central to the control of cell envelope biogenesis | Descriptor: | GlmZ small RNA, RNase adapter protein RapZ, Ribonuclease E | Authors: | Islam, M.S, Hardwick, H.W, Chirgadze, D.Y, Luisi, B.F. | Deposit date: | 2022-09-07 | Release date: | 2022-10-05 | Last modified: | 2023-01-25 | Method: | ELECTRON MICROSCOPY (3.99 Å) | Cite: | Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis. Embo J., 42, 2023
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7DCY
| Apo form of Mycoplasma genitalium RNase R | Descriptor: | MAGNESIUM ION, Ribonuclease R | Authors: | Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X. | Deposit date: | 2020-10-27 | Release date: | 2021-03-17 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.972 Å) | Cite: | Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation. Nucleic Acids Res., 49, 2021
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7DIC
| Mycoplasma genitalium RNase R in complex with single-stranded RNA | Descriptor: | MAGNESIUM ION, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), Ribonuclease R | Authors: | Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X. | Deposit date: | 2020-11-18 | Release date: | 2021-03-17 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.242 Å) | Cite: | Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation. Nucleic Acids Res., 49, 2021
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7DOL
| Mycoplasma genitalium RNase R in complex with double-stranded RNA | Descriptor: | MAGNESIUM ION, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'), Ribonuclease R | Authors: | Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X. | Deposit date: | 2020-12-14 | Release date: | 2021-03-17 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.002 Å) | Cite: | Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation. Nucleic Acids Res., 49, 2021
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7DID
| Mycoplasma genitalium RNase R in complex with ribose methylated single-stranded RNA | Descriptor: | MAGNESIUM ION, RNA (5'-R(*AP*AP*AP*A)-3'), Ribonuclease R | Authors: | Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X. | Deposit date: | 2020-11-18 | Release date: | 2021-03-17 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation. Nucleic Acids Res., 49, 2021
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3V11
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