PDB: 69 件ウェブページステータス検索Chemie searchBIRD

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6WU6	succinate-coenzyme Q reductase 分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Lyu, M, Su, C.-C, Morgan, C.E, Yu, E.W. 登録日 2020-05-04 公開日 2021-02-03 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins. Nat.Methods, 18, 2021
6LO8	Cryo-EM structure of the TIM22 complex from yeast 分子名称: Mitochondrial import inner membrane translocase subunit TIM10, Mitochondrial import inner membrane translocase subunit TIM12, Mitochondrial import inner membrane translocase subunit TIM18, ... 著者 Zhang, Y, Zhou, X, Wu, X, Li, L. 登録日 2020-01-04 公開日 2020-09-30 最終更新日 2021-03-17 実験手法 ELECTRON MICROSCOPY (3.83 Å) 主引用文献 Structure of the mitochondrial TIM22 complex from yeast. Cell Res., 31, 2021
5XMJ	Crystal structure of quinol:fumarate reductase from Desulfovibrio gigas 分子名称: DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Guan, H.H, Hsieh, Y.C, Lin, P.R, Chen, C.J. 登録日 2017-05-15 公開日 2018-06-06 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structural insights into the electron/proton transfer pathways in the quinol:fumarate reductase from Desulfovibrio gigas. Sci Rep, 8, 2018
8GS8	cryo-EM structure of the human respiratory complex II 分子名称: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Du, Z, Zhou, X, Lai, Y, Xu, J, Zhang, Y, Zhou, S, Liu, F, Gao, Y, Gong, H, Rao, Z. 登録日 2022-09-05 公開日 2023-05-10 実験手法 ELECTRON MICROSCOPY (2.86 Å) 主引用文献 Structure of the human respiratory complex II. Proc.Natl.Acad.Sci.USA, 120, 2023
7JZ2	Succinate: quinone oxidoreductase SQR from E.coli K12 分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Lyu, M, Su, C.-C, Morgan, C.E, Bolla, J.R, Robinson, C.V, Yu, E.W. 登録日 2020-09-01 公開日 2021-01-20 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins. Nat.Methods, 18, 2021
1E7P	QUINOL:FUMARATE REDUCTASE FROM WOLINELLA SUCCINOGENES 分子名称: DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Lancaster, C.R.D, Kroeger, A. 登録日 2000-09-01 公開日 2001-04-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 A Third Crystal Form of Wolinella Succinogenes Quinol:Fumarate Reductase Reveals Domain Closure at the Site of Fumarate Reduction Eur.J.Biochem., 268, 2001
1YQ4	Avian respiratory complex ii with 3-nitropropionate and ubiquinone 分子名称: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, 3-NITROPROPANOIC ACID, Coenzyme Q10, ... 著者 Huang, L, Sun, G, Cobessi, D, Wang, A, Shen, J.T, Tung, E.Y, Anderson, V.E, Berry, E.A. 登録日 2005-02-01 公開日 2005-12-20 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 3-Nitropropionic Acid Is a Suicide Inhibitor of Mitochondrial Respiration That, upon Oxidation by Complex II, Forms a Covalent Adduct with a Catalytic Base Arginine in the Active Site of the Enzyme J.Biol.Chem., 281, 2006
5C3J	Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with Ubiquinone-1 分子名称: Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Harada, S, Shiba, T, Sato, D, Yamamoto, A, Nagahama, M, Yone, A, Inaoka, D.K, Sakamoto, K, Inoue, M, Honma, T, Kita, K. 登録日 2015-06-17 公開日 2016-06-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria To Be Published
5C2T	Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with rhodoquinone-2 分子名称: 2-amino-5-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-3-methoxy-6-methylcyclohexa-2,5-diene-1,4-dione, Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Harada, S, Shiba, T, Sato, D, Yamamoto, A, Nagahama, M, Yone, A, Inaoka, D.K, Sakamoto, K, Inoue, M, Honma, T, Kita, K. 登録日 2015-06-16 公開日 2015-08-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria Int J Mol Sci, 16, 2015
6MYT	Avian mitochondrial complex II with Atpenin A5 bound, sidechain in pocket 分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 3-[(2S,4S,5R)-5,6-DICHLORO-2,4-DIMETHYL-1-OXOHEXYL]-4-HYDROXY-5,6-DIMETHOXY-2(1H)-PYRIDINONE, DI(HYDROXYETHYL)ETHER, ... 著者 Berry, E.A, Huang, L.-S. 登録日 2018-11-02 公開日 2019-11-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors. Biochim Biophys Acta Proteins Proteom, 1869, 2021
6MYU	Avian mitochondrial complex II crystallized in the presence of HQNO 分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Berry, E.A, Huang, L.-S. 登録日 2018-11-02 公開日 2019-11-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors. Biochim Biophys Acta Proteins Proteom, 1869, 2021
6MYO	Avian mitochondrial complex II with flutolanyl bound 分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Berry, E.A, Huang, L.-S. 登録日 2018-11-02 公開日 2019-11-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors. Biochim Biophys Acta Proteins Proteom, 1869, 2021
1NEK	Complex II (Succinate Dehydrogenase) From E. Coli with ubiquinone bound 分子名称: CALCIUM ION, CARDIOLIPIN, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Yankovskaya, V, Horsefield, R, Tornroth, S, Luna-Chavez, C, Miyoshi, H, Leger, C, Byrne, B, Cecchini, G, Iwata, S. 登録日 2002-12-11 公開日 2003-02-25 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Architecture of succinate dehydrogenase and reactive oxygen species generation. Science, 299, 2003
1NEN	Complex II (Succinate Dehydrogenase) From E. Coli with Dinitrophenol-17 inhibitor co-crystallized at the ubiquinone binding site 分子名称: 2-[1-METHYLHEXYL]-4,6-DINITROPHENOL, CALCIUM ION, CARDIOLIPIN, ... 著者 Yankovskaya, V, Horsefield, R, Tornroth, S, Luna-Chavez, C, Miyoshi, H, Leger, C, Byrne, B, Cecchini, G, Iwata, S. 登録日 2002-12-11 公開日 2003-02-25 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Architecture of succinate dehydrogenase and reactive oxygen species generation Science, 299, 2003
2FBW	Avian respiratory complex II with carboxin bound 分子名称: (~{Z})-2-oxidanylbut-2-enedioic acid, 2-METHYL-N-PHENYL-5,6-DIHYDRO-1,4-OXATHIINE-3-CARBOXAMIDE, AZIDE ION, ... 著者 Huang, L.S, Sun, G, Cobessi, D, Wang, A.C, Shen, J.T, Tung, E.Y, Anderson, V.E, Berry, E.A. 登録日 2005-12-10 公開日 2005-12-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 3-nitropropionic acid is a suicide inhibitor of mitochondrial respiration that, upon oxidation by complex II, forms a covalent adduct with a catalytic base arginine in the active site of the enzyme. J.Biol.Chem., 281, 2006
2H89	Avian Respiratory Complex II with Malonate Bound 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A. 登録日 2006-06-06 公開日 2006-06-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the Biochim.Biophys.Acta, 1757
2H88	Avian Mitochondrial Respiratory Complex II at 1.8 Angstrom Resolution 分子名称: AZIDE ION, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A. 登録日 2006-06-06 公開日 2006-06-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the Biochim.Biophys.Acta, 1757
1QLB	respiratory complex II-like fumarate reductase from Wolinella succinogenes 分子名称: CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Lancaster, C.R.D, Kroeger, A, Auer, M, Michel, H. 登録日 1999-08-25 公開日 1999-11-29 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Structure of Fumarate Reductase from Wolinella Succinogenes at 2.2 Angstroms Resolution Nature, 402, 1999
3SFD	crystal structure of porcine mitochondrial respiratory complex II bound with oxaloacetate and pentachlorophenol 分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Zhou, Q.J, Zhai, Y.J, Liu, M, Sun, F. 登録日 2011-06-13 公開日 2011-09-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Thiabendazole inhibits ubiquinone reduction activity of mitochondrial respiratory complex II via a water molecule mediated binding feature. Protein Cell, 2, 2011
3SFE	crystal structure of porcine mitochondrial respiratory complex II bound with oxaloacetate and thiabendazole 分子名称: 2-(1,3-THIAZOL-4-YL)-1H-BENZIMIDAZOLE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Zhou, Q.J, Zhai, Y.J, Liu, M, Sun, F. 登録日 2011-06-13 公開日 2011-09-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Thiabendazole inhibits ubiquinone reduction activity of mitochondrial respiratory complex II via a water molecule mediated binding feature. Protein Cell, 2, 2011
3VRA	Mitochondrial rhodoquinol-fumarate reductase from the parasitic nematode Ascaris suum with the specific inhibitor Atpenin A5 分子名称: 3-[(2S,4S,5R)-5,6-DICHLORO-2,4-DIMETHYL-1-OXOHEXYL]-4-HYDROXY-5,6-DIMETHOXY-2(1H)-PYRIDINONE, Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Shimizu, H, Shiba, T, Inaoka, D.K, Osanai, A, Kita, K, Sakamoto, K, Harada, S. 登録日 2012-04-07 公開日 2013-04-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.44 Å) 主引用文献 Crystal structure of mitochondrial quinol-fumarate reductase from parasitic nematode Ascaris suum To be Published
6LUM	Structure of Mycobacterium smegmatis succinate dehydrogenase 2 分子名称: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL, 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, ... 著者 Gao, Y, Gong, H, Zhou, X, Xiao, Y, Wang, W, Ji, W, Wang, Q, Rao, Z. 登録日 2020-01-29 公開日 2020-05-27 最終更新日 2021-10-20 実験手法 ELECTRON MICROSCOPY (2.84 Å) 主引用文献 Cryo-EM structure of trimeric Mycobacterium smegmatis succinate dehydrogenase with a membrane-anchor SdhF. Nat Commun, 11, 2020
3VR9	Mitochondrial rhodoquinol-fumarate reductase from the parasitic nematode Ascaris suum with the specific inhibitor flutolanil 分子名称: Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Shimizu, H, Shiba, T, Inaoka, D.K, Osanai, A, Kita, K, Sakamoto, K, Harada, S. 登録日 2012-04-07 公開日 2013-04-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Crystal structure of mitochondrial quinol-fumarate reductase from parasitic nematode Ascaris suum To be Published
3VR8	Mitochondrial rhodoquinol-fumarate reductase from the parasitic nematode Ascaris suum 分子名称: 2-amino-3-methoxy-6-methyl-5-[(2E)-3-methylhex-2-en-1-yl]cyclohexa-2,5-diene-1,4-dione, Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Shimizu, H, Shiba, T, Inaoka, D.K, Osanai, A, Kita, K, Sakamoto, K, Harada, S. 登録日 2012-04-07 公開日 2012-07-11 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Crystal structure of mitochondrial quinol-fumarate reductase from the parasitic nematode Ascaris suum J.Biochem., 151, 2012
3VRB	Mitochondrial rhodoquinol-fumarate reductase from the parasitic nematode Ascaris suum with the specific inhibitor flutolanil and substrate fumarate 分子名称: Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Shimizu, H, Shiba, T, Inaoka, D.K, Osanai, A, Kita, K, Sakamoto, K, Harada, S. 登録日 2012-04-07 公開日 2012-07-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.91 Å) 主引用文献 Crystal structure of mitochondrial quinol-fumarate reductase from the parasitic nematode Ascaris suum J.Biochem., 151, 2012

 

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