Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8X2L

Structure of human phagocyte NADPH oxidase in the resting state in the presence of 2 mM NADPH

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005768cellular_componentendosome
A0005789cellular_componentendoplasmic reticulum membrane
A0005886cellular_componentplasma membrane
A0006801biological_processsuperoxide metabolic process
A0006954biological_processinflammatory response
A0009055molecular_functionelectron transfer activity
A0014895biological_processsmooth muscle hypertrophy
A0016020cellular_componentmembrane
A0016175molecular_functionsuperoxide-generating NAD(P)H oxidase activity
A0016491molecular_functionoxidoreductase activity
A0017004biological_processcytochrome complex assembly
A0017124molecular_functionSH3 domain binding
A0030141cellular_componentsecretory granule
A0030670cellular_componentphagocytic vesicle membrane
A0032755biological_processpositive regulation of interleukin-6 production
A0032760biological_processpositive regulation of tumor necrosis factor production
A0034137biological_processpositive regulation of toll-like receptor 2 signaling pathway
A0035579cellular_componentspecific granule membrane
A0042554biological_processsuperoxide anion generation
A0043020cellular_componentNADPH oxidase complex
A0045087biological_processinnate immune response
A0045730biological_processrespiratory burst
A0046872molecular_functionmetal ion binding
A0046982molecular_functionprotein heterodimerization activity
A0050665biological_processhydrogen peroxide biosynthetic process
A0050766biological_processpositive regulation of phagocytosis
A0051279biological_processregulation of release of sequestered calcium ion into cytosol
A0051649biological_processestablishment of localization in cell
A0070254biological_processmucus secretion
A0070257biological_processpositive regulation of mucus secretion
A0070821cellular_componenttertiary granule membrane
A0072593biological_processreactive oxygen species metabolic process
A1900426biological_processpositive regulation of defense response to bacterium
A1903428biological_processpositive regulation of reactive oxygen species biosynthetic process
B0005515molecular_functionprotein binding
B0005635cellular_componentnuclear envelope
B0005737cellular_componentcytoplasm
B0005789cellular_componentendoplasmic reticulum membrane
B0005886cellular_componentplasma membrane
B0006801biological_processsuperoxide metabolic process
B0006952biological_processdefense response
B0006954biological_processinflammatory response
B0007584biological_processresponse to nutrient
B0009055molecular_functionelectron transfer activity
B0009410biological_processresponse to xenobiotic stimulus
B0016175molecular_functionsuperoxide-generating NAD(P)H oxidase activity
B0016491molecular_functionoxidoreductase activity
B0020037molecular_functionheme binding
B0030425cellular_componentdendrite
B0030670cellular_componentphagocytic vesicle membrane
B0032760biological_processpositive regulation of tumor necrosis factor production
B0034220biological_processmonoatomic ion transmembrane transport
B0034702cellular_componentmonoatomic ion channel complex
B0035579cellular_componentspecific granule membrane
B0042554biological_processsuperoxide anion generation
B0043020cellular_componentNADPH oxidase complex
B0043025cellular_componentneuronal cell body
B0045087biological_processinnate immune response
B0045335cellular_componentphagocytic vesicle
B0045730biological_processrespiratory burst
B0045766biological_processpositive regulation of angiogenesis
B0046872molecular_functionmetal ion binding
B0046982molecular_functionprotein heterodimerization activity
B0050660molecular_functionflavin adenine dinucleotide binding
B0050664molecular_functionoxidoreductase activity, acting on NAD(P)H, oxygen as acceptor
B0050665biological_processhydrogen peroxide biosynthetic process
B0070821cellular_componenttertiary granule membrane
B0071276biological_processcellular response to cadmium ion
B0071361biological_processcellular response to ethanol
B0071456biological_processcellular response to hypoxia
B0097038cellular_componentperinuclear endoplasmic reticulum
B0097411biological_processhypoxia-inducible factor-1alpha signaling pathway
B1904044biological_processresponse to aldosterone
B1904845biological_processcellular response to L-glutamine
B1990776biological_processresponse to angiotensin
Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCEATH
ChainResidueDetails
LTYR192-HIS198

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues334
DetailsTOPO_DOM: Cytoplasmic => ECO:0000255
ChainResidueDetails
BGLY2-GLU8
BPRO70-LYS102
BTHR191-SER200
BGLU283-PHE570

site_idSWS_FT_FI2
Number of Residues120
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
BGLY9-TYR29
BALA49-LEU69
BMET103-VAL123
BALA170-ILE190
BTYR201-ILE221
BPHE262-CYS282

site_idSWS_FT_FI3
Number of Residues102
DetailsTOPO_DOM: Extracellular => ECO:0000255
ChainResidueDetails
BTYR30-SER48
BGLU124-LEU169
BHIS222-GLN261

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: axial binding residue => ECO:0000305
ChainResidueDetails
BHIS101
BHIS115
BHIS209
BHIS222

site_idSWS_FT_FI5
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255
ChainResidueDetails
BHIS338

site_idSWS_FT_FI6
Number of Residues3
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
ChainResidueDetails
BASN132
BASN149
BASN240

site_idSWS_FT_FI7
Number of Residues11
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:Q61093
ChainResidueDetails
BLYS161
BLYS506
BLYS567
BLYS255
BLYS294
BLYS299
BLYS306
BLYS328
BLYS334
BLYS381

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon