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6WBN

Cryo-EM structure of human Pannexin 1 channel N255A mutant, gap junction

Functional Information from GO Data
ChainGOidnamespacecontents
A0006812biological_processmonoatomic cation transport
A0015267molecular_functionchannel activity
A0032732biological_processpositive regulation of interleukin-1 production
B0006812biological_processmonoatomic cation transport
B0015267molecular_functionchannel activity
B0032732biological_processpositive regulation of interleukin-1 production
C0006812biological_processmonoatomic cation transport
C0015267molecular_functionchannel activity
C0032732biological_processpositive regulation of interleukin-1 production
D0006812biological_processmonoatomic cation transport
D0015267molecular_functionchannel activity
D0032732biological_processpositive regulation of interleukin-1 production
E0006812biological_processmonoatomic cation transport
E0015267molecular_functionchannel activity
E0032732biological_processpositive regulation of interleukin-1 production
F0006812biological_processmonoatomic cation transport
F0015267molecular_functionchannel activity
F0032732biological_processpositive regulation of interleukin-1 production
G0006812biological_processmonoatomic cation transport
G0015267molecular_functionchannel activity
G0032732biological_processpositive regulation of interleukin-1 production
H0006812biological_processmonoatomic cation transport
H0015267molecular_functionchannel activity
H0032732biological_processpositive regulation of interleukin-1 production
I0006812biological_processmonoatomic cation transport
I0015267molecular_functionchannel activity
I0032732biological_processpositive regulation of interleukin-1 production
J0006812biological_processmonoatomic cation transport
J0015267molecular_functionchannel activity
J0032732biological_processpositive regulation of interleukin-1 production
K0006812biological_processmonoatomic cation transport
K0015267molecular_functionchannel activity
K0032732biological_processpositive regulation of interleukin-1 production
L0006812biological_processmonoatomic cation transport
L0015267molecular_functionchannel activity
L0032732biological_processpositive regulation of interleukin-1 production
M0006812biological_processmonoatomic cation transport
M0015267molecular_functionchannel activity
M0032732biological_processpositive regulation of interleukin-1 production
N0006812biological_processmonoatomic cation transport
N0015267molecular_functionchannel activity
N0032732biological_processpositive regulation of interleukin-1 production
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue PTY A 401
ChainResidue
AGLY99
AASN100
ALEU101
ATRP104
ACLR405
BILE279
BPTY402

site_idAC2
Number of Residues6
Detailsbinding site for residue PTY A 402
ChainResidue
ASER239
AGLN274
ALEU275
GPTY401
APHE235
ALEU237

site_idAC3
Number of Residues6
Detailsbinding site for residue 3PE A 403
ChainResidue
AMET37
ATYR293
AARG300
AGLU336
GPHE126
GLEU219

site_idAC4
Number of Residues6
Detailsbinding site for residue DGA A 404
ChainResidue
ATYR10
ALEU17
AMET37
AILE41
GLEU125
GPHE129

site_idAC5
Number of Residues2
Detailsbinding site for residue CLR A 405
ChainResidue
ATYR230
APTY401

site_idAC6
Number of Residues6
Detailsbinding site for residue DGA A 407
ChainResidue
ALEU125
APHE129
BTYR10
BLEU17
BMET37
BILE41

site_idAC7
Number of Residues7
Detailsbinding site for residue PTY B 401
ChainResidue
BGLY99
BASN100
BLEU101
BTRP104
BCLR404
CILE279
CPTY402

site_idAC8
Number of Residues6
Detailsbinding site for residue PTY B 402
ChainResidue
APTY401
BPHE235
BLEU237
BSER239
BGLN274
BLEU275

site_idAC9
Number of Residues5
Detailsbinding site for residue 3PE B 403
ChainResidue
APHE126
BMET37
BTYR293
BARG300
BGLU336

site_idAD1
Number of Residues2
Detailsbinding site for residue CLR B 404
ChainResidue
BTYR230
BPTY401

site_idAD2
Number of Residues6
Detailsbinding site for residue DGA B 406
ChainResidue
BLEU125
BPHE129
CTYR10
CLEU17
CMET37
CILE41

site_idAD3
Number of Residues7
Detailsbinding site for residue PTY C 401
ChainResidue
CGLY99
CASN100
CLEU101
CTRP104
CCLR404
DILE279
DPTY402

site_idAD4
Number of Residues6
Detailsbinding site for residue PTY C 402
ChainResidue
BPTY401
CPHE235
CLEU237
CSER239
CGLN274
CLEU275

site_idAD5
Number of Residues6
Detailsbinding site for residue 3PE C 403
ChainResidue
BPHE126
BLEU219
CMET37
CTYR293
CARG300
CGLU336

site_idAD6
Number of Residues2
Detailsbinding site for residue CLR C 404
ChainResidue
CTYR230
CPTY401

site_idAD7
Number of Residues6
Detailsbinding site for residue DGA C 406
ChainResidue
CLEU125
CPHE129
DTYR10
DLEU17
DMET37
DILE41

site_idAD8
Number of Residues7
Detailsbinding site for residue PTY D 401
ChainResidue
DGLY99
DASN100
DLEU101
DTRP104
DCLR404
EILE279
EPTY402

site_idAD9
Number of Residues6
Detailsbinding site for residue PTY D 402
ChainResidue
CPTY401
DPHE235
DLEU237
DSER239
DGLN274
DLEU275

site_idAE1
Number of Residues6
Detailsbinding site for residue 3PE D 403
ChainResidue
CPHE126
CLEU219
DMET37
DTYR293
DARG300
DGLU336

site_idAE2
Number of Residues2
Detailsbinding site for residue CLR D 404
ChainResidue
DTYR230
DPTY401

site_idAE3
Number of Residues6
Detailsbinding site for residue DGA D 406
ChainResidue
DLEU125
DPHE129
ETYR10
ELEU17
EMET37
EILE41

site_idAE4
Number of Residues7
Detailsbinding site for residue PTY E 401
ChainResidue
EGLY99
EASN100
ELEU101
ETRP104
ECLR404
FILE279
FPTY402

site_idAE5
Number of Residues6
Detailsbinding site for residue PTY E 402
ChainResidue
DPTY401
EPHE235
ELEU237
ESER239
EGLN274
ELEU275

site_idAE6
Number of Residues6
Detailsbinding site for residue 3PE E 403
ChainResidue
DPHE126
DLEU219
EMET37
ETYR293
EARG300
EGLU336

site_idAE7
Number of Residues2
Detailsbinding site for residue CLR E 404
ChainResidue
ETYR230
EPTY401

site_idAE8
Number of Residues6
Detailsbinding site for residue DGA E 406
ChainResidue
ELEU125
EPHE129
FTYR10
FLEU17
FMET37
FILE41

site_idAE9
Number of Residues7
Detailsbinding site for residue PTY F 401
ChainResidue
FGLY99
FASN100
FLEU101
FTRP104
FCLR404
GILE279
GPTY402

site_idAF1
Number of Residues6
Detailsbinding site for residue PTY F 402
ChainResidue
EPTY401
FPHE235
FLEU237
FSER239
FGLN274
FLEU275

site_idAF2
Number of Residues6
Detailsbinding site for residue 3PE F 403
ChainResidue
EPHE126
ELEU219
FMET37
FTYR293
FARG300
FGLU336

site_idAF3
Number of Residues2
Detailsbinding site for residue CLR F 404
ChainResidue
FTYR230
FPTY401

site_idAF4
Number of Residues6
Detailsbinding site for residue DGA F 406
ChainResidue
FLEU125
FPHE129
GTYR10
GLEU17
GMET37
GILE41

site_idAF5
Number of Residues8
Detailsbinding site for residue PTY G 401
ChainResidue
ALEU52
AILE279
APTY402
GGLY99
GASN100
GLEU101
GTRP104
GCLR404

site_idAF6
Number of Residues6
Detailsbinding site for residue PTY G 402
ChainResidue
FPTY401
GPHE235
GLEU237
GSER239
GGLN274
GLEU275

site_idAF7
Number of Residues6
Detailsbinding site for residue 3PE G 403
ChainResidue
FPHE126
FLEU219
GMET37
GTYR293
GARG300
GGLU336

site_idAF8
Number of Residues2
Detailsbinding site for residue CLR G 404
ChainResidue
GTYR230
GPTY401

site_idAF9
Number of Residues8
Detailsbinding site for residue PTY H 401
ChainResidue
HGLY99
HASN100
HLEU101
HTRP104
HCLR404
ILEU52
IILE279
IPTY402

site_idAG1
Number of Residues6
Detailsbinding site for residue PTY H 402
ChainResidue
HPHE235
HLEU237
HSER239
HGLN274
HLEU275
NPTY402

site_idAG2
Number of Residues6
Detailsbinding site for residue 3PE H 403
ChainResidue
HMET37
HTYR293
HARG300
HGLU336
NPHE126
NLEU219

site_idAG3
Number of Residues2
Detailsbinding site for residue CLR H 404
ChainResidue
HTYR230
HPTY401

site_idAG4
Number of Residues6
Detailsbinding site for residue DGA H 406
ChainResidue
HLEU125
HPHE129
ITYR10
ILEU17
IMET37
IILE41

site_idAG5
Number of Residues7
Detailsbinding site for residue PTY I 401
ChainResidue
IGLY99
IASN100
ILEU101
ITRP104
ICLR404
JILE279
JPTY402

site_idAG6
Number of Residues6
Detailsbinding site for residue PTY I 402
ChainResidue
HPTY401
IPHE235
ILEU237
ISER239
IGLN274
ILEU275

site_idAG7
Number of Residues6
Detailsbinding site for residue 3PE I 403
ChainResidue
HPHE126
HLEU219
IMET37
ITYR293
IARG300
IGLU336

site_idAG8
Number of Residues2
Detailsbinding site for residue CLR I 404
ChainResidue
ITYR230
IPTY401

site_idAG9
Number of Residues6
Detailsbinding site for residue DGA I 406
ChainResidue
ILEU125
IPHE129
JTYR10
JLEU17
JMET37
JILE41

site_idAH1
Number of Residues7
Detailsbinding site for residue PTY J 401
ChainResidue
JGLY99
JASN100
JLEU101
JTRP104
JCLR404
KILE279
KPTY402

site_idAH2
Number of Residues6
Detailsbinding site for residue PTY J 402
ChainResidue
IPTY401
JPHE235
JLEU237
JSER239
JGLN274
JLEU275

site_idAH3
Number of Residues6
Detailsbinding site for residue 3PE J 403
ChainResidue
IPHE126
ILEU219
JMET37
JTYR293
JARG300
JGLU336

site_idAH4
Number of Residues2
Detailsbinding site for residue CLR J 404
ChainResidue
JTYR230
JPTY401

site_idAH5
Number of Residues6
Detailsbinding site for residue DGA J 406
ChainResidue
JLEU125
JPHE129
KTYR10
KLEU17
KMET37
KILE41

site_idAH6
Number of Residues7
Detailsbinding site for residue PTY K 401
ChainResidue
KGLY99
KASN100
KLEU101
KTRP104
KCLR404
LILE279
LPTY402

site_idAH7
Number of Residues6
Detailsbinding site for residue PTY K 402
ChainResidue
JPTY401
KPHE235
KLEU237
KSER239
KGLN274
KLEU275

site_idAH8
Number of Residues6
Detailsbinding site for residue 3PE K 403
ChainResidue
JPHE126
JLEU219
KMET37
KTYR293
KARG300
KGLU336

site_idAH9
Number of Residues2
Detailsbinding site for residue CLR K 404
ChainResidue
KTYR230
KPTY401

site_idAI1
Number of Residues6
Detailsbinding site for residue DGA K 406
ChainResidue
KLEU125
KPHE129
LTYR10
LLEU17
LMET37
LILE41

site_idAI2
Number of Residues7
Detailsbinding site for residue PTY L 401
ChainResidue
LGLY99
LASN100
LLEU101
LTRP104
LCLR404
MILE279
MPTY402

site_idAI3
Number of Residues6
Detailsbinding site for residue PTY L 402
ChainResidue
KPTY401
LPHE235
LLEU237
LSER239
LGLN274
LLEU275

site_idAI4
Number of Residues6
Detailsbinding site for residue 3PE L 403
ChainResidue
KPHE126
KLEU219
LMET37
LTYR293
LARG300
LGLU336

site_idAI5
Number of Residues2
Detailsbinding site for residue CLR L 404
ChainResidue
LTYR230
LPTY401

site_idAI6
Number of Residues6
Detailsbinding site for residue DGA L 406
ChainResidue
LLEU125
LPHE129
MTYR10
MLEU17
MMET37
MILE41

site_idAI7
Number of Residues7
Detailsbinding site for residue PTY M 401
ChainResidue
MGLY99
MASN100
MLEU101
MTRP104
MCLR404
NILE279
NPTY403

site_idAI8
Number of Residues6
Detailsbinding site for residue PTY M 402
ChainResidue
LPTY401
MPHE235
MLEU237
MSER239
MGLN274
MLEU275

site_idAI9
Number of Residues6
Detailsbinding site for residue 3PE M 403
ChainResidue
LPHE126
LLEU219
MMET37
MTYR293
MARG300
MGLU336

site_idAJ1
Number of Residues2
Detailsbinding site for residue CLR M 404
ChainResidue
MTYR230
MPTY401

site_idAJ2
Number of Residues6
Detailsbinding site for residue DGA M 406
ChainResidue
MLEU125
MPHE129
NTYR10
NLEU17
NMET37
NILE41

site_idAJ3
Number of Residues6
Detailsbinding site for residue DGA N 401
ChainResidue
HTYR10
HLEU17
HMET37
HILE41
NLEU125
NPHE129

site_idAJ4
Number of Residues7
Detailsbinding site for residue PTY N 402
ChainResidue
HILE279
HPTY402
NGLY99
NASN100
NLEU101
NTRP104
NCLR405

site_idAJ5
Number of Residues6
Detailsbinding site for residue PTY N 403
ChainResidue
MPTY401
NPHE235
NLEU237
NSER239
NGLN274
NLEU275

site_idAJ6
Number of Residues6
Detailsbinding site for residue 3PE N 404
ChainResidue
MPHE126
MLEU219
NMET37
NTYR293
NARG300
NGLU336

site_idAJ7
Number of Residues2
Detailsbinding site for residue CLR N 405
ChainResidue
NTYR230
NPTY402

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1792
DetailsTOPO_DOM: Cytoplasmic => ECO:0000255
ChainResidueDetails
AMET1-CYS40
EARG128-ARG217
FMET1-CYS40
FARG128-ARG217
GMET1-CYS40
GARG128-ARG217
HMET1-CYS40
HARG128-ARG217
IMET1-CYS40
IARG128-ARG217
JMET1-CYS40
AARG128-ARG217
JARG128-ARG217
KMET1-CYS40
KARG128-ARG217
LMET1-CYS40
LARG128-ARG217
MMET1-CYS40
MARG128-ARG217
NMET1-CYS40
NARG128-ARG217
BMET1-CYS40
BARG128-ARG217
CMET1-CYS40
CARG128-ARG217
DMET1-CYS40
DARG128-ARG217
EMET1-CYS40

site_idSWS_FT_FI2
Number of Residues1120
DetailsTRANSMEM: Helical => ECO:0000255|PROSITE-ProRule:PRU00351
ChainResidueDetails
AILE41-GLY61
CLYS107-TRP127
CLEU218-SER238
CLEU267-LEU287
DILE41-GLY61
DLYS107-TRP127
DLEU218-SER238
DLEU267-LEU287
EILE41-GLY61
ELYS107-TRP127
ELEU218-SER238
ALYS107-TRP127
ELEU267-LEU287
FILE41-GLY61
FLYS107-TRP127
FLEU218-SER238
FLEU267-LEU287
GILE41-GLY61
GLYS107-TRP127
GLEU218-SER238
GLEU267-LEU287
HILE41-GLY61
ALEU218-SER238
HLYS107-TRP127
HLEU218-SER238
HLEU267-LEU287
IILE41-GLY61
ILYS107-TRP127
ILEU218-SER238
ILEU267-LEU287
JILE41-GLY61
JLYS107-TRP127
JLEU218-SER238
ALEU267-LEU287
JLEU267-LEU287
KILE41-GLY61
KLYS107-TRP127
KLEU218-SER238
KLEU267-LEU287
LILE41-GLY61
LLYS107-TRP127
LLEU218-SER238
LLEU267-LEU287
MILE41-GLY61
BILE41-GLY61
MLYS107-TRP127
MLEU218-SER238
MLEU267-LEU287
NILE41-GLY61
NLYS107-TRP127
NLEU218-SER238
NLEU267-LEU287
BLYS107-TRP127
BLEU218-SER238
BLEU267-LEU287
CILE41-GLY61

site_idSWS_FT_FI3
Number of Residues994
DetailsTOPO_DOM: Extracellular => ECO:0000255
ChainResidueDetails
ATHR62-HIS106
ESER239-LYS266
FTHR62-HIS106
FSER239-LYS266
GTHR62-HIS106
GSER239-LYS266
HTHR62-HIS106
HSER239-LYS266
ITHR62-HIS106
ISER239-LYS266
JTHR62-HIS106
ASER239-LYS266
JSER239-LYS266
KTHR62-HIS106
KSER239-LYS266
LTHR62-HIS106
LSER239-LYS266
MTHR62-HIS106
MSER239-LYS266
NTHR62-HIS106
NSER239-LYS266
BTHR62-HIS106
BSER239-LYS266
CTHR62-HIS106
CSER239-LYS266
DTHR62-HIS106
DSER239-LYS266
ETHR62-HIS106

site_idSWS_FT_FI4
Number of Residues28
DetailsMOD_RES: S-nitrosocysteine => ECO:0000250|UniProtKB:Q9JIP4
ChainResidueDetails
ACYS40
ECYS347
FCYS40
FCYS347
GCYS40
GCYS347
HCYS40
HCYS347
ICYS40
ICYS347
JCYS40
ACYS347
JCYS347
KCYS40
KCYS347
LCYS40
LCYS347
MCYS40
MCYS347
NCYS40
NCYS347
BCYS40
BCYS347
CCYS40
CCYS347
DCYS40
DCYS347
ECYS40

site_idSWS_FT_FI5
Number of Residues14
DetailsMOD_RES: Phosphotyrosine => ECO:0000269|PubMed:30814251
ChainResidueDetails
ATYR199
JTYR199
KTYR199
LTYR199
MTYR199
NTYR199
BTYR199
CTYR199
DTYR199
ETYR199
FTYR199
GTYR199
HTYR199
ITYR199

site_idSWS_FT_FI6
Number of Residues14
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:17715132, ECO:0000269|PubMed:30918116, ECO:0000269|PubMed:32494015, ECO:0000269|PubMed:33947837
ChainResidueDetails
AALA255
JALA255
KALA255
LALA255
MALA255
NALA255
BALA255
CALA255
DALA255
EALA255
FALA255
GALA255
HALA255
IALA255

226707

PDB entries from 2024-10-30

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