6TVO
Human CRM1-RanGTP in complex with Leptomycin B
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000054 | biological_process | ribosomal subunit export from nucleus |
A | 0000055 | biological_process | ribosomal large subunit export from nucleus |
A | 0000056 | biological_process | ribosomal small subunit export from nucleus |
A | 0000776 | cellular_component | kinetochore |
A | 0003723 | molecular_function | RNA binding |
A | 0005049 | molecular_function | nuclear export signal receptor activity |
A | 0005515 | molecular_function | protein binding |
A | 0005634 | cellular_component | nucleus |
A | 0005635 | cellular_component | nuclear envelope |
A | 0005642 | cellular_component | annulate lamellae |
A | 0005654 | cellular_component | nucleoplasm |
A | 0005730 | cellular_component | nucleolus |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006406 | biological_process | mRNA export from nucleus |
A | 0006611 | biological_process | protein export from nucleus |
A | 0006886 | biological_process | intracellular protein transport |
A | 0006913 | biological_process | nucleocytoplasmic transport |
A | 0010824 | biological_process | regulation of centrosome duplication |
A | 0015030 | cellular_component | Cajal body |
A | 0015031 | biological_process | protein transport |
A | 0016020 | cellular_component | membrane |
A | 0031267 | molecular_function | small GTPase binding |
A | 0031965 | cellular_component | nuclear membrane |
A | 0032434 | biological_process | regulation of proteasomal ubiquitin-dependent protein catabolic process |
A | 0032991 | cellular_component | protein-containing complex |
A | 0034504 | biological_process | protein localization to nucleus |
A | 0042176 | biological_process | regulation of protein catabolic process |
A | 0042254 | biological_process | ribosome biogenesis |
A | 0043231 | cellular_component | intracellular membrane-bounded organelle |
A | 0046825 | biological_process | regulation of protein export from nucleus |
A | 0051028 | biological_process | mRNA transport |
A | 1990904 | cellular_component | ribonucleoprotein complex |
B | 0003924 | molecular_function | GTPase activity |
B | 0005525 | molecular_function | GTP binding |
B | 0006913 | biological_process | nucleocytoplasmic transport |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 21 |
Details | binding site for residue GTP B 201 |
Chain | Residue |
B | ASP18 |
B | TYR39 |
B | ALA41 |
B | THR42 |
B | GLY68 |
B | ASN122 |
B | LYS123 |
B | ASP125 |
B | ILE126 |
B | SER150 |
B | ALA151 |
B | GLY20 |
B | LYS152 |
B | MG202 |
B | THR21 |
B | GLY22 |
B | LYS23 |
B | THR24 |
B | THR25 |
B | GLU36 |
B | LYS37 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue MG B 202 |
Chain | Residue |
B | THR24 |
B | THR42 |
B | GTP201 |
site_id | AC3 |
Number of Residues | 11 |
Details | binding site for residue LMB A 1101 |
Chain | Residue |
A | LYS514 |
A | LYS522 |
A | LEU525 |
A | CYS528 |
A | GLU529 |
A | LYS537 |
A | ALA541 |
A | PHE561 |
A | THR564 |
A | LYS568 |
A | PHE572 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
A | SER391 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | MOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861 |
Chain | Residue | Details |
A | LYS446 | |
A | LYS693 |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | MOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:Q80U96 |
Chain | Residue | Details |
A | THR448 |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | MOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q80U96 |
Chain | Residue | Details |
A | SER450 |
site_id | SWS_FT_FI5 |
Number of Residues | 1 |
Details | MOD_RES: Phosphotyrosine => ECO:0000250|UniProtKB:Q80U96 |
Chain | Residue | Details |
A | TYR454 |
site_id | SWS_FT_FI6 |
Number of Residues | 1 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
A | SER1031 |
site_id | SWS_FT_FI7 |
Number of Residues | 1 |
Details | MOD_RES: N-acetylalanine => ECO:0000269|Ref.12, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378 |
Chain | Residue | Details |
B | ALA2 |
site_id | SWS_FT_FI8 |
Number of Residues | 1 |
Details | MOD_RES: Phosphothreonine => ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
B | THR24 |
site_id | SWS_FT_FI9 |
Number of Residues | 1 |
Details | MOD_RES: N6-acetyllysine => ECO:0000269|PubMed:31075303 |
Chain | Residue | Details |
B | LYS37 |
site_id | SWS_FT_FI10 |
Number of Residues | 2 |
Details | MOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861 |
Chain | Residue | Details |
B | LYS60 | |
B | LYS99 |
site_id | SWS_FT_FI11 |
Number of Residues | 1 |
Details | MOD_RES: N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861 |
Chain | Residue | Details |
B | LYS71 |
site_id | SWS_FT_FI12 |
Number of Residues | 1 |
Details | MOD_RES: N6-acetyllysine => ECO:0000269|PubMed:29040603 |
Chain | Residue | Details |
B | LYS134 |
site_id | SWS_FT_FI13 |
Number of Residues | 1 |
Details | MOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P62827 |
Chain | Residue | Details |
B | LYS159 |
site_id | SWS_FT_FI14 |
Number of Residues | 1 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate |
Chain | Residue | Details |
B | LYS71 |
site_id | SWS_FT_FI15 |
Number of Residues | 2 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733 |
Chain | Residue | Details |
B | LYS152 |