Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6QC2

Ovine respiratory supercomplex I+III2 open class 2

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
4L	0005743	cellular_component	mitochondrial inner membrane
4L	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
4L	0016651	molecular_function	oxidoreductase activity, acting on NAD(P)H
4L	0030964	cellular_component	NADH dehydrogenase complex
4L	0042773	biological_process	ATP synthesis coupled electron transport
4L	0045271	cellular_component	respiratory chain complex I
4L	1902600	biological_process	proton transmembrane transport
a1	0046872	molecular_function	metal ion binding
a2	0004222	molecular_function	metalloendopeptidase activity
a2	0006508	biological_process	proteolysis
a2	0046872	molecular_function	metal ion binding
a3	0046872	molecular_function	metal ion binding
A3	0005743	cellular_component	mitochondrial inner membrane
A3	0045271	cellular_component	respiratory chain complex I
a4	0004222	molecular_function	metalloendopeptidase activity
a4	0006508	biological_process	proteolysis
a4	0046872	molecular_function	metal ion binding
A5	0022904	biological_process	respiratory electron transport chain
A6	0045271	cellular_component	respiratory chain complex I
A7	0005743	cellular_component	mitochondrial inner membrane
A7	0042773	biological_process	ATP synthesis coupled electron transport
A8	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
AA	0006633	biological_process	fatty acid biosynthetic process
AB	0006633	biological_process	fatty acid biosynthetic process
AJ	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
AK	0005743	cellular_component	mitochondrial inner membrane
AK	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
AK	0045271	cellular_component	respiratory chain complex I
AL	0016020	cellular_component	membrane
AL	0045271	cellular_component	respiratory chain complex I
b1	0005743	cellular_component	mitochondrial inner membrane
b1	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
b1	0008121	molecular_function	quinol-cytochrome-c reductase activity
b1	0009055	molecular_function	electron transfer activity
b1	0016020	cellular_component	membrane
b1	0016491	molecular_function	oxidoreductase activity
b1	0022904	biological_process	respiratory electron transport chain
b1	0045275	cellular_component	respiratory chain complex III
b1	1902600	biological_process	proton transmembrane transport
B1	0005739	cellular_component	mitochondrion
b2	0005743	cellular_component	mitochondrial inner membrane
b2	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
b2	0008121	molecular_function	quinol-cytochrome-c reductase activity
b2	0009055	molecular_function	electron transfer activity
b2	0016020	cellular_component	membrane
b2	0016491	molecular_function	oxidoreductase activity
b2	0022904	biological_process	respiratory electron transport chain
b2	0045275	cellular_component	respiratory chain complex III
b2	1902600	biological_process	proton transmembrane transport
B2	0005743	cellular_component	mitochondrial inner membrane
B2	0045271	cellular_component	respiratory chain complex I
B3	0005739	cellular_component	mitochondrion
B3	0022900	biological_process	electron transport chain
B4	0005739	cellular_component	mitochondrion
B6	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
B7	0005739	cellular_component	mitochondrion
B8	0005739	cellular_component	mitochondrion
B8	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
B9	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
c1	0009055	molecular_function	electron transfer activity
c1	0020037	molecular_function	heme binding
C1	0005739	cellular_component	mitochondrion
C1	0045271	cellular_component	respiratory chain complex I
c2	0009055	molecular_function	electron transfer activity
c2	0020037	molecular_function	heme binding
C2	0005743	cellular_component	mitochondrial inner membrane
C2	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
d1	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
d1	0045275	cellular_component	respiratory chain complex III
D1	0003954	molecular_function	NADH dehydrogenase activity
D1	0005743	cellular_component	mitochondrial inner membrane
D1	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
D1	0009060	biological_process	aerobic respiration
D1	0016020	cellular_component	membrane
D1	1902600	biological_process	proton transmembrane transport
d2	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
d2	0045275	cellular_component	respiratory chain complex III
D2	0005743	cellular_component	mitochondrial inner membrane
D2	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
D2	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
D2	0032981	biological_process	mitochondrial respiratory chain complex I assembly
D2	0045271	cellular_component	respiratory chain complex I
D2	1902600	biological_process	proton transmembrane transport
D3	0005743	cellular_component	mitochondrial inner membrane
D3	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
D3	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
D3	0030964	cellular_component	NADH dehydrogenase complex
D3	0045271	cellular_component	respiratory chain complex I
D3	1902600	biological_process	proton transmembrane transport
D4	0003954	molecular_function	NADH dehydrogenase activity
D4	0005743	cellular_component	mitochondrial inner membrane
D4	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
D4	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
D4	0009060	biological_process	aerobic respiration
D4	0015990	biological_process	electron transport coupled proton transport
D4	0032981	biological_process	mitochondrial respiratory chain complex I assembly
D4	0042773	biological_process	ATP synthesis coupled electron transport
D4	0045271	cellular_component	respiratory chain complex I
D4	0048039	molecular_function	ubiquinone binding
D5	0003954	molecular_function	NADH dehydrogenase activity
D5	0005743	cellular_component	mitochondrial inner membrane
D5	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
D5	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
D5	0015990	biological_process	electron transport coupled proton transport
D5	0032981	biological_process	mitochondrial respiratory chain complex I assembly
D5	0042773	biological_process	ATP synthesis coupled electron transport
D5	0045271	cellular_component	respiratory chain complex I
D6	0005739	cellular_component	mitochondrion
D6	0005743	cellular_component	mitochondrial inner membrane
D6	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
D6	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
D6	0032981	biological_process	mitochondrial respiratory chain complex I assembly
D6	0045271	cellular_component	respiratory chain complex I
D6	1902600	biological_process	proton transmembrane transport
f1	0008121	molecular_function	quinol-cytochrome-c reductase activity
f1	0016020	cellular_component	membrane
f1	0051537	molecular_function	2 iron, 2 sulfur cluster binding
f2	0008121	molecular_function	quinol-cytochrome-c reductase activity
f2	0016020	cellular_component	membrane
f2	0051537	molecular_function	2 iron, 2 sulfur cluster binding
h1	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
h2	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
i1	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
i1	0045275	cellular_component	respiratory chain complex III
i2	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
i2	0045275	cellular_component	respiratory chain complex III
q1	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
q1	0045275	cellular_component	respiratory chain complex III
q2	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
q2	0045275	cellular_component	respiratory chain complex III
S1	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
S1	0016020	cellular_component	membrane
S1	0016491	molecular_function	oxidoreductase activity
S1	0016651	molecular_function	oxidoreductase activity, acting on NAD(P)H
S1	0042773	biological_process	ATP synthesis coupled electron transport
S1	0051536	molecular_function	iron-sulfur cluster binding
S2	0016651	molecular_function	oxidoreductase activity, acting on NAD(P)H
S2	0048038	molecular_function	quinone binding
S2	0051287	molecular_function	NAD binding
S3	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
S3	0016651	molecular_function	oxidoreductase activity, acting on NAD(P)H
S4	0022900	biological_process	electron transport chain
S6	0006120	biological_process	mitochondrial electron transport, NADH to ubiquinone
S7	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
S7	0048038	molecular_function	quinone binding
S7	0051536	molecular_function	iron-sulfur cluster binding
S7	0051539	molecular_function	4 iron, 4 sulfur cluster binding
S8	0016020	cellular_component	membrane
S8	0016651	molecular_function	oxidoreductase activity, acting on NAD(P)H
S8	0051539	molecular_function	4 iron, 4 sulfur cluster binding
V1	0008137	molecular_function	NADH dehydrogenase (ubiquinone) activity
V1	0010181	molecular_function	FMN binding
V1	0051287	molecular_function	NAD binding
V1	0051539	molecular_function	4 iron, 4 sulfur cluster binding
V2	0016491	molecular_function	oxidoreductase activity
V3	0005739	cellular_component	mitochondrion
V3	0045271	cellular_component	respiratory chain complex I

Functional Information from PDB Data

site_id	AC1
Number of Residues	12
Details	binding site for residue 3PE D1 501

Chain	Residue
AM	ILE140
D6	ASN46
D6	SER50
D6	LEU54
AM	THR143
D1	ASN97
D1	MET98
D1	ASN99
D1	LEU100
D1	PHE104
D3	LEU3
D6	LEU45

site_id	AC2
Number of Residues	11
Details	binding site for residue 3PE D5 701

Chain	Residue
B8	ASN87
B8	ARG88
B8	ASP90
D4	LEU405
D5	THR166
D5	LEU169
D5	GLN170
D5	TYR174
D5	HIS534
D5	PRO538
D5	ASN541

site_id	AC3
Number of Residues	10
Details	binding site for residue 3PE D4 501

Chain	Residue
D2	LEU288
D2	TYR291
D4	LEU147
D4	TYR148
D4	PHE151
D4	TYR152
D5	LEU562
D5	ILE566
D5	SER567
D5	GLN570

site_id	AC4
Number of Residues	7
Details	binding site for residue PC1 D4 502

Chain	Residue
AK	TRP132
D2	ASP274
D2	ILE276
D2	ILE277
D4	TYR166
D4	SER191
D4	PHE194

site_id	AC5
Number of Residues	9
Details	binding site for residue ZMP AB 101

Chain	Residue
AB	SER44
B9	GLN12
B9	LEU43
B9	ARG46
B9	PHE47
B9	HIS50
B9	LYS51
B9	LEU62
B9	GLU69

site_id	AC6
Number of Residues	14
Details	binding site for residue HEM b1 401

Chain	Residue
b1	GLN44
b1	ILE45
b1	GLY48
b1	LEU51
b1	ARG80
b1	HIS83
b1	ALA87
b1	PHE90
b1	GLY130
b1	LEU133
b1	PRO134
b1	HIS182
b1	PHE183
b1	PRO186

site_id	AC7
Number of Residues	11
Details	binding site for residue HEM b1 402

Chain	Residue
b1	TRP31
b1	HIS97
b1	VAL98
b1	ARG100
b1	TRP113
b1	GLY116
b1	LEU119
b1	HIS196
b1	LEU200
b1	SER205
b1	ASN206

site_id	AC8
Number of Residues	14
Details	binding site for residue HEC c1 501

Chain	Residue
c1	VAL36
c1	CYS37
c1	SER39
c1	CYS40
c1	HIS41
c1	ALA108
c1	ARG120
c1	TYR126
c1	LEU130
c1	PHE152
c1	GLY158
c1	MET159
c1	PRO162
c1	VAL185

site_id	AC9
Number of Residues	7
Details	binding site for residue FES f1 501

Chain	Residue
f1	CYS139
f1	HIS141
f1	LEU142
f1	CYS158
f1	HIS161
f1	SER163
f1	TYR165

site_id	AD1
Number of Residues	7
Details	binding site for residue CDL b2 401

Chain	Residue
b2	ALA17
b2	LEU197
b2	LEU198
b1	ILE13
b1	LEU198
b1	GLU202
b2	ILE13

site_id	AD2
Number of Residues	13
Details	binding site for residue HEM b2 402

Chain	Residue
b2	GLN44
b2	GLY48
b2	VAL66
b2	ARG80
b2	HIS83
b2	ALA87
b2	PHE90
b2	GLY130
b2	PRO134
b2	HIS182
b2	PHE183
b2	PRO186
b2	ASN255

site_id	AD3
Number of Residues	12
Details	binding site for residue HEM b2 403

Chain	Residue
b2	TRP31
b2	GLY34
b2	HIS97
b2	ARG100
b2	SER106
b2	TRP113
b2	GLY116
b2	LEU119
b2	HIS196
b2	LEU200
b2	SER205
b2	ASN206

site_id	AD4
Number of Residues	7
Details	binding site for residue 3PE b2 404

Chain	Residue
b2	TRP30
b2	TYR103
b2	TYR104
b2	MET316
b2	GLN322
b2	TRP326
b2	CDL405

site_id	AD5
Number of Residues	7
Details	binding site for residue CDL b2 405

Chain	Residue
b2	SER28
b2	SER29
b2	TRP30
b2	3PE404
c2	CDL502
q2	ARG40
q2	THR41

site_id	AD6
Number of Residues	14
Details	binding site for residue HEC c2 501

Chain	Residue
c2	VAL36
c2	CYS37
c2	SER39
c2	CYS40
c2	HIS41
c2	ASN105
c2	ALA108
c2	PRO110
c2	TYR126
c2	PHE152
c2	ILE157
c2	GLY158
c2	MET159
c2	PRO162

site_id	AD7
Number of Residues	11
Details	binding site for residue CDL c2 502

Chain	Residue
b2	SER29
b2	ASN32
b2	GLY231
b2	CDL405
c2	TYR219
c2	LYS222
c2	ARG223
c2	LYS230
q2	TYR29
q2	GLY33
q2	ARG40

site_id	AD8
Number of Residues	6
Details	binding site for residue 3PE f2 201

Chain	Residue
c2	MET203
c2	LYS206
f2	TYR49
f2	ASN53
f2	VAL54
f2	GLN57

site_id	AD9
Number of Residues	7
Details	binding site for residue FES f2 202

Chain	Residue
f2	CYS139
f2	HIS141
f2	LEU142
f2	CYS158
f2	HIS161
f2	GLY162
f2	SER163

site_id	AE1
Number of Residues	9
Details	binding site for residue SF4 V1 500

Chain	Residue
V1	PRO203
V1	SER358
V1	CYS359
V1	GLY360
V1	GLN361
V1	CYS362
V1	CYS365
V1	THR403
V1	CYS405

site_id	AE2
Number of Residues	16
Details	binding site for residue FMN V1 501

Chain	Residue
V1	GLY67
V1	ARG68
V1	GLY69
V1	ALA71
V1	LYS78
V1	ASN96
V1	ASP98
V1	GLU99
V1	GLY100
V1	GLU101
V1	TYR184
V1	GLY187
V1	GLU188
V1	VAL222
V1	ASN224
V1	THR227

site_id	AE3
Number of Residues	7
Details	binding site for residue FES V2 300

Chain	Residue
V2	CYS103
V2	THR105
V2	PRO107
V2	CYS108
V2	CYS144
V2	ALA147
V2	CYS148

site_id	AE4
Number of Residues	9
Details	binding site for residue SF4 S1 801

Chain	Residue
S1	HIS101
S1	ASP104
S1	CYS105
S1	CYS108
S1	CYS114
S1	GLN117
S1	ARG152
S1	VAL205
S1	GLY206

site_id	AE5
Number of Residues	8
Details	binding site for residue SF4 S1 802

Chain	Residue
S1	CYS153
S1	ILE154
S1	GLN155
S1	CYS156
S1	THR157
S1	CYS159
S1	CYS203
S1	VAL205

site_id	AE6
Number of Residues	7
Details	binding site for residue FES S1 803

Chain	Residue
S1	CYS41
S1	TYR42
S1	GLY50
S1	CYS52
S1	ARG53
S1	CYS55
S1	CYS69

site_id	AE7
Number of Residues	9
Details	binding site for residue SF4 S7 300

Chain	Residue
S2	ARG105
S7	ALA53
S7	CYS54
S7	CYS55
S7	GLY90
S7	SER118
S7	CYS119
S7	CYS149
S7	PRO150

site_id	AE8
Number of Residues	11
Details	binding site for residue SF4 S8 201

Chain	Residue
S8	HIS65
S8	CYS87
S8	PRO88
S8	ILE92
S8	CYS116
S8	ILE117
S8	TYR118
S8	CYS119
S8	GLY120
S8	PHE121
S8	CYS122

site_id	AE9
Number of Residues	10
Details	binding site for residue SF4 S8 202

Chain	Residue
S8	CYS77
S8	ILE78
S8	ALA79
S8	CYS80
S8	LYS81
S8	LEU82
S8	CYS83
S8	TYR109
S8	CYS126
S8	ILE131

site_id	AF1
Number of Residues	5
Details	binding site for residue ZN S6 300

Chain	Residue
S6	CYS59
S6	HIS68
S6	VAL71
S6	CYS84
S6	CYS87

site_id	AF2
Number of Residues	17
Details	binding site for residue NDP A9 401

Chain	Residue
A9	THR27
A9	PHE29
A9	LEU30
A9	ARG50
A9	TRP73
A9	LEU94
A9	VAL95
A9	GLY96
A9	ARG97
A9	GLU98
A9	PHE104
A9	ILE132
A9	HIS134
A9	TYR145
A9	LYS149
A9	ILE171
A9	ARG177

site_id	AF3
Number of Residues	14
Details	binding site for Di-peptide ZMP AA 101 and SER AA 44

Chain	Residue
A6	LYS28
A6	ARG32
A6	TRP38
A6	VAL62
A6	MET65
A6	PHE66
A6	ASN69
A6	ALA70
A6	PHE106
AA	ASP43
AA	LEU45
AA	ASP46
AA	GLN47
AA	VAL48

Functional Information from PROSITE/UniProt

site_id	PS00012
Number of Residues	16
Details	PHOSPHOPANTETHEINE Phosphopantetheine attachment site. DLGLDSLDQVEIIMAM

Chain	Residue	Details
AB	ASP39-MET54

site_id	PS00018
Number of Residues	13
Details	EF_HAND_1 EF-hand calcium-binding domain. DIDAEKLMCpqEI

Chain	Residue	Details
AB	ASP64-ILE76

site_id	PS00143
Number of Residues	24
Details	INSULINASE Insulinase family, zinc-binding region signature. GsryenfnnlGtSHLLRLAsSlTT

Chain	Residue	Details
a2	GLY54-THR77

site_id	PS00198
Number of Residues	12
Details	4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaVCP

Chain	Residue	Details
S8	CYS77-PRO88
S8	CYS116-PRO127

site_id	PS00535
Number of Residues	12
Details	COMPLEX1_49K Respiratory chain NADH dehydrogenase 49 Kd subunit signature. LHRGtEKLiEyK

Chain	Residue	Details
S2	LEU83-LYS94

site_id	PS00542
Number of Residues	22
Details	COMPLEX1_30K Respiratory chain NADH dehydrogenase 30 Kd subunit signature. EREiwDMFgvffanHpdlRrIL

Chain	Residue	Details
S3	GLU131-LEU152

site_id	PS00641
Number of Residues	18
Details	COMPLEX1_75K_1 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. PrfCYherlsvaGnCRmC

Chain	Residue	Details
S1	PRO38-CYS55

site_id	PS00642
Number of Residues	13
Details	COMPLEX1_75K_2 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. CPiCDqGGeCdLQ

Chain	Residue	Details
S1	CYS105-GLN117

site_id	PS00643
Number of Residues	11
Details	COMPLEX1_75K_3 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. RCIqCtRCIrF

Chain	Residue	Details
S1	ARG152-PHE162

site_id	PS00644
Number of Residues	16
Details	COMPLEX1_51K_1 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. GAGAYICGEETALIES

Chain	Residue	Details
V1	GLY180-SER195

site_id	PS00645
Number of Residues	12
Details	COMPLEX1_51K_2 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. ESCGqCtPCReG

Chain	Residue	Details
V1	GLU357-GLY368

site_id	PS00667
Number of Residues	16
Details	COMPLEX1_ND1_1 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. GLLQpIaDAIKLFiKE

Chain	Residue	Details
D1	GLY44-GLU59

site_id	PS00668
Number of Residues	14
Details	COMPLEX1_ND1_2 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. PFDLTEGEseLVs.G

Chain	Residue	Details
D1	PRO197-GLY210

site_id	PS01099
Number of Residues	19
Details	COMPLEX1_24K Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. DklFTlieveCLGaCvnAP

Chain	Residue	Details
V2	ASP134-PRO152

site_id	PS01150
Number of Residues	17
Details	COMPLEX1_20K Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. GcDRIVPVDIYvPgCPP

Chain	Residue	Details
S7	GLY135-PRO151

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1142
Details	Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	322
Details	Transmembrane: {"description":"Helical","evidences":[{"source":"UniProtKB","id":"P00157","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	8
Details	Binding site: {"description":"axial binding residue","evidences":[{"source":"UniProtKB","id":"P00157","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI4
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P00157","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)