6OX2
SETD3in Complex with an Actin Peptide with the Target Histidine Fully Methylated
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000785 | cellular_component | chromatin |
| A | 0003713 | molecular_function | transcription coactivator activity |
| A | 0003779 | molecular_function | actin binding |
| A | 0005515 | molecular_function | protein binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005654 | cellular_component | nucleoplasm |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006338 | biological_process | chromatin remodeling |
| A | 0008168 | molecular_function | methyltransferase activity |
| A | 0016279 | molecular_function | protein-lysine N-methyltransferase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0018021 | biological_process | peptidyl-histidine methylation |
| A | 0018023 | biological_process | peptidyl-lysine trimethylation |
| A | 0018064 | molecular_function | protein-L-histidine N-tele-methyltransferase activity |
| A | 0030047 | biological_process | actin modification |
| A | 0032259 | biological_process | methylation |
| A | 0042800 | molecular_function | histone H3K4 methyltransferase activity |
| A | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| A | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| A | 0046975 | molecular_function | histone H3K36 methyltransferase activity |
| A | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| A | 0070472 | biological_process | regulation of uterine smooth muscle contraction |
| B | 0000785 | cellular_component | chromatin |
| B | 0003713 | molecular_function | transcription coactivator activity |
| B | 0003779 | molecular_function | actin binding |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005654 | cellular_component | nucleoplasm |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006338 | biological_process | chromatin remodeling |
| B | 0008168 | molecular_function | methyltransferase activity |
| B | 0016279 | molecular_function | protein-lysine N-methyltransferase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0018021 | biological_process | peptidyl-histidine methylation |
| B | 0018023 | biological_process | peptidyl-lysine trimethylation |
| B | 0018064 | molecular_function | protein-L-histidine N-tele-methyltransferase activity |
| B | 0030047 | biological_process | actin modification |
| B | 0032259 | biological_process | methylation |
| B | 0042800 | molecular_function | histone H3K4 methyltransferase activity |
| B | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| B | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| B | 0046975 | molecular_function | histone H3K36 methyltransferase activity |
| B | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| B | 0070472 | biological_process | regulation of uterine smooth muscle contraction |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 22 |
| Details | binding site for residue SAH A 601 |
| Chain | Residue |
| A | ARG74 |
| A | ASN277 |
| A | HIS278 |
| A | TYR312 |
| A | SER324 |
| A | PHE326 |
| A | PHE328 |
| A | HOH728 |
| A | HOH821 |
| A | HOH834 |
| A | HOH848 |
| A | GLU102 |
| A | HOH850 |
| A | HOH870 |
| Y | HIC73 |
| A | GLU103 |
| A | PHE105 |
| A | PRO179 |
| A | ARG253 |
| A | ASP274 |
| A | MET275 |
| A | CYS276 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 602 |
| Chain | Residue |
| A | ASP204 |
| A | HIS323 |
| A | EDO603 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | binding site for residue EDO A 603 |
| Chain | Residue |
| A | GLN200 |
| A | ALA201 |
| A | ASP204 |
| A | ALA318 |
| A | GLU470 |
| A | EDO602 |
| A | EDO613 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 604 |
| Chain | Residue |
| A | ILE24 |
| A | GLN63 |
| A | TYR220 |
| A | PHE238 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 605 |
| Chain | Residue |
| A | PHE78 |
| A | PRO79 |
| A | GLU96 |
| A | MET97 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 606 |
| Chain | Residue |
| A | PHE327 |
| A | VAL458 |
| A | LYS461 |
| A | MET462 |
| A | LYS465 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 607 |
| Chain | Residue |
| A | LEU340 |
| A | GLY341 |
| A | PHE387 |
| A | ARG432 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 608 |
| Chain | Residue |
| A | ASP334 |
| A | PHE371 |
| A | GLY469 |
| A | GLU472 |
| A | HOH711 |
| A | HOH759 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 609 |
| Chain | Residue |
| A | LEU399 |
| A | GLY400 |
| A | ASP401 |
| A | SER402 |
| A | ALA403 |
| A | ARG406 |
| site_id | AD1 |
| Number of Residues | 1 |
| Details | binding site for residue EDO A 610 |
| Chain | Residue |
| A | ASN168 |
| site_id | AD2 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 611 |
| Chain | Residue |
| A | ILE147 |
| A | ARG214 |
| A | GLN215 |
| Y | TRP79 |
| Y | ASP80 |
| site_id | AD3 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 612 |
| Chain | Residue |
| A | MET82 |
| A | SER86 |
| A | HOH733 |
| B | SER86 |
| site_id | AD4 |
| Number of Residues | 8 |
| Details | binding site for residue EDO A 613 |
| Chain | Residue |
| A | ASN317 |
| A | ALA318 |
| A | ASP334 |
| A | ARG335 |
| A | VAL336 |
| A | LEU466 |
| A | GLU470 |
| A | EDO603 |
| site_id | AD5 |
| Number of Residues | 1 |
| Details | binding site for residue EDO A 614 |
| Chain | Residue |
| A | ALA350 |
| site_id | AD6 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 615 |
| Chain | Residue |
| A | LYS125 |
| A | PHE170 |
| A | TRP171 |
| site_id | AD7 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 616 |
| Chain | Residue |
| A | LYS448 |
| A | HOH731 |
| A | HOH769 |
| site_id | AD8 |
| Number of Residues | 22 |
| Details | binding site for residue SAH B 601 |
| Chain | Residue |
| B | PHE328 |
| B | GOL610 |
| B | HOH778 |
| B | HOH808 |
| B | HOH817 |
| B | HOH831 |
| B | HOH833 |
| B | HOH839 |
| Z | HIC73 |
| B | ARG74 |
| B | GLU103 |
| B | PHE105 |
| B | PRO179 |
| B | ARG253 |
| B | ASP274 |
| B | MET275 |
| B | CYS276 |
| B | ASN277 |
| B | HIS278 |
| B | TYR312 |
| B | SER324 |
| B | PHE326 |
| site_id | AD9 |
| Number of Residues | 3 |
| Details | binding site for residue EDO B 602 |
| Chain | Residue |
| B | ALA378 |
| B | ILE407 |
| B | GLY411 |
| site_id | AE1 |
| Number of Residues | 3 |
| Details | binding site for residue EDO B 603 |
| Chain | Residue |
| B | LEU340 |
| B | GLY341 |
| B | ARG432 |
| site_id | AE2 |
| Number of Residues | 4 |
| Details | binding site for residue EDO B 604 |
| Chain | Residue |
| B | GLU45 |
| B | GLU48 |
| B | SER207 |
| B | LYS210 |
| site_id | AE3 |
| Number of Residues | 2 |
| Details | binding site for residue EDO B 605 |
| Chain | Residue |
| B | ASP80 |
| B | GLU87 |
| site_id | AE4 |
| Number of Residues | 2 |
| Details | binding site for residue EDO B 606 |
| Chain | Residue |
| B | GLU354 |
| B | ALA357 |
| site_id | AE5 |
| Number of Residues | 5 |
| Details | binding site for residue EDO B 607 |
| Chain | Residue |
| A | GLY72 |
| A | ASP76 |
| B | ARG60 |
| B | LYS61 |
| B | GLN63 |
| site_id | AE6 |
| Number of Residues | 4 |
| Details | binding site for residue EDO B 608 |
| Chain | Residue |
| B | PRO179 |
| B | SER180 |
| B | GLU181 |
| B | GOL610 |
| site_id | AE7 |
| Number of Residues | 4 |
| Details | binding site for residue EDO B 609 |
| Chain | Residue |
| B | ARG124 |
| B | LYS125 |
| B | ASP291 |
| B | ASP292 |
| site_id | AE8 |
| Number of Residues | 6 |
| Details | binding site for residue GOL B 610 |
| Chain | Residue |
| B | ARG74 |
| B | GLY104 |
| B | PHE105 |
| B | SAH601 |
| B | EDO608 |
| B | HOH793 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Tele-methylhistidine","evidences":[{"source":"PubMed","id":"30526847","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"30626964","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"30785395","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31388018","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32503840","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 440 |
| Details | Domain: {"description":"SET","evidences":[{"source":"PROSITE-ProRule","id":"PRU00190","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 20 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"30626964","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"30785395","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31388018","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31911441","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31993215","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32503840","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"JUN-2011","submissionDatabase":"PDB data bank","title":"Crystal structure of human SET domain-containing protein 3.","authors":["Zeng H.","Dong A.","Walker J.R.","Loppnau P.","Bountra C.","Weigelt J.","Arrowsmith C.H.","Edwards A.M.","Min J.","Wu H."]}},{"source":"PDB","id":"3SMT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6ICT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6ICV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6JAT","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6MBJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6MBK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6MBL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6OX0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6OX1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6OX2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6OX3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6OX4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6OX5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6V62","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6V63","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WK1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WK2","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
