Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6KQQ

NSD1 SET domain in complex with BT3 and SAM

Functional Information from GO Data
ChainGOidnamespacecontents
A0005634cellular_componentnucleus
A0042054molecular_functionhistone methyltransferase activity
B0005634cellular_componentnucleus
B0042054molecular_functionhistone methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue SAM A 2101
ChainResidue
AARG1952
AHIS2021
ATYR2058
AVAL2069
ACYS2070
ALYS2071
ALEU2081
ADQL2102
AHOH2219
AHOH2232
AHOH2266
ATRP1954
AHOH2378
ATHR1994
AASN1995
APHE1996
ATYR1997
AARG2017
AMET2019
AASN2020

site_idAC2
Number of Residues12
Detailsbinding site for residue DQL A 2102
ChainResidue
ATHR1994
APHE1996
ATYR2058
ACYS2062
ALEU2063
AASN2065
AGLY2066
ATHR2068
AGLY2082
ASAM2101
AHOH2230
AHOH2377

site_idAC3
Number of Residues20
Detailsbinding site for residue DW9 A 2103
ChainResidue
AASP1864
ALYS1865
ALYS1866
APRO1867
ALYS1871
AILE1946
AGLY2010
APRO2011
ALYS2012
AASN2014
ATYR2015
AARG2017
APHE2018
AHOH2206
AHOH2231
AHOH2287
AHOH2316
AHOH2331
AHOH2387
AHOH2390

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 2104
ChainResidue
ACYS2023
ACYS2070
ACYS2072
ACYS2077

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN A 2105
ChainResidue
ACYS1905
ACYS1920
ACYS1925
ACYS1931

site_idAC6
Number of Residues4
Detailsbinding site for residue ZN A 2106
ChainResidue
ACYS1895
ACYS1897
ACYS1905
ACYS1911

site_idAC7
Number of Residues7
Detailsbinding site for residue CA A 2107
ChainResidue
AGLU1910
AHOH2282
BGLU1978
BLYS2003
BHOH2285
BHOH2304
BHOH2305

site_idAC8
Number of Residues6
Detailsbinding site for residue CA A 2108
ChainResidue
AGLU1978
ALYS2003
AHOH2298
AHOH2401
BHOH2216
BHOH2290

site_idAC9
Number of Residues19
Detailsbinding site for residue SAM B 2101
ChainResidue
BARG1952
BTRP1954
BTHR1994
BASN1995
BPHE1996
BTYR1997
BARG2017
BASN2020
BHIS2021
BTYR2058
BVAL2069
BCYS2070
BLYS2071
BLEU2081
BDQL2102
BHOH2211
BHOH2260
BHOH2271
BHOH2292

site_idAD1
Number of Residues10
Detailsbinding site for residue GOL B 2103
ChainResidue
BILE1892
BPRO1893
BARG1894
BHOH2210
BHOH2255
BHOH2273
BHOH2311
APRO1869
ALYS2067
BSER1890

site_idAD2
Number of Residues4
Detailsbinding site for residue ZN B 2104
ChainResidue
BCYS1905
BCYS1920
BCYS1925
BCYS1931

site_idAD3
Number of Residues4
Detailsbinding site for residue ZN B 2105
ChainResidue
BCYS1895
BCYS1897
BCYS1905
BCYS1911

site_idAD4
Number of Residues4
Detailsbinding site for residue ZN B 2106
ChainResidue
BCYS2023
BCYS2070
BCYS2072
BCYS2077

site_idAD5
Number of Residues13
Detailsbinding site for Di-peptide DQL B 2102 and CYS B 2062
ChainResidue
BTHR1994
BPHE1996
BMET1998
BTYR2058
BGLU2061
BLEU2063
BGLY2064
BGLY2066
BTHR2068
BGLY2082
BARG2084
BSAM2101
BHOH2221

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING:
ChainResidueDetails
AARG1952
ATHR1994
AASN2020
BARG1952
BTHR1994
BASN2020

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00190, ECO:0000269|PubMed:21196496
ChainResidueDetails
AASN2065
ALYS2071
BASN2065
BLYS2071

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon