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6I5N

Crystal structure of SOCS2:Elongin C:Elongin B in complex with growth hormone receptor peptide

Functional Information from GO Data
ChainGOidnamespacecontents
A0035556biological_processintracellular signal transduction
B0006368biological_processtranscription elongation by RNA polymerase II
B0030891cellular_componentVCB complex
B0070449cellular_componentelongin complex
C0006511biological_processubiquitin-dependent protein catabolic process
D0035556biological_processintracellular signal transduction
E0006368biological_processtranscription elongation by RNA polymerase II
E0030891cellular_componentVCB complex
E0070449cellular_componentelongin complex
F0006511biological_processubiquitin-dependent protein catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue CO A 201
ChainResidue
AHIS149
AHOH338
AHOH365
AHOH383
KHIS4
KHOH108

site_idAC2
Number of Residues3
Detailsbinding site for residue CO D 201
ChainResidue
DHIS149
LSER2
LHIS4

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 D 202
ChainResidue
DGLN45
DSER162
DARG168
DTYR190
DHOH339

site_idAC4
Number of Residues18
Detailsbinding site for Di-peptide PTR I 0 and THR I 1
ChainResidue
AVAL55
AARG73
ASER75
ASER76
ATHR83
ATHR93
AASN94
ALEU95
AARG96
IVAL-3
IPRO-2
IASP-1
ISER2
IHOH101
IHOH102
KILE5
KVLM6
KHOH106

site_idAC5
Number of Residues6
Detailsbinding site for Di-peptide ILE I 5 and VLM I 6
ChainResidue
AHOH361
CMET45
IHIS4
IHOH104
KSER2
KILE3

site_idAC6
Number of Residues14
Detailsbinding site for Di-peptide ASP I -1 and PTR I 0
ChainResidue
AVAL55
AARG73
ASER75
ASER76
ATHR83
ATHR93
AASN94
AARG96
AHOH351
IPRO-2
ITHR1
IHOH102
IHOH103
KHOH106

site_idAC7
Number of Residues16
Detailsbinding site for Di-peptide PTR J 0 and THR J 1
ChainResidue
DVAL55
DARG73
DSER75
DSER76
DTHR83
DTHR93
DASN94
DLEU95
DARG96
JVAL-3
JPRO-2
JASP-1
JSER2
JHOH101
LILE5
LVLM6

site_idAC8
Number of Residues10
Detailsbinding site for Di-peptide ASP J -1 and PTR J 0
ChainResidue
DVAL55
DARG73
DSER75
DSER76
DTHR83
DTHR93
DASN94
DARG96
JPRO-2
JTHR1

site_idAC9
Number of Residues12
Detailsbinding site for Di-peptide PTR K 0 and THR K 1
ChainResidue
AMET132
ACAS133
AASP135
ALYS136
AHIS149
AHOH367
KASP-1
KPRO-2
KSER2
KILE3
KHOH104
KHOH107

site_idAD1
Number of Residues11
Detailsbinding site for Di-peptide ILE K 5 and VLM K 6
ChainResidue
KHOH106
KHOH109
ATHR88
AILE109
AVAL148
ITHR1
ISER2
IILE3
KHIS4
KHOH102
KHOH103

site_idAD2
Number of Residues11
Detailsbinding site for Di-peptide ASP K -1 and PTR K 0
ChainResidue
AMET132
AASP135
ALYS136
AHIS149
AHOH367
KPRO-2
KVAL-3
KTHR1
KSER2
KHOH107
KHOH110

site_idAD3
Number of Residues7
Detailsbinding site for Di-peptide PTR L 0 and THR L 1
ChainResidue
DMET132
DCAS133
DHIS149
LPRO-2
LASP-1
LSER2
LILE3

site_idAD4
Number of Residues7
Detailsbinding site for Di-peptide ILE L 5 and VLM L 6
ChainResidue
DVAL148
DLEU150
JTHR1
JSER2
JILE3
LHIS4
LHOH101

site_idAD5
Number of Residues6
Detailsbinding site for Di-peptide ASP L -1 and PTR L 0
ChainResidue
DMET132
DCAS133
DHIS149
LPRO-2
LTHR1
LHOH102

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: N-acetylmethionine => ECO:0000269|Ref.6, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22814378
ChainResidueDetails
BMET1
EMET1

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:P62869
ChainResidueDetails
BTHR84
ETHR84

site_idSWS_FT_FI3
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:31578312
ChainResidueDetails
ALYS173
DLYS173

224201

PDB entries from 2024-08-28

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