6HPR
Crystal structure of cIAP1 RING domain bound to UbcH5B-Ub and a non-covalent Ub
Functional Information from GO Data
Chain | GOid | namespace | contents |
C | 0000151 | cellular_component | ubiquitin ligase complex |
C | 0000166 | molecular_function | nucleotide binding |
C | 0000209 | biological_process | protein polyubiquitination |
C | 0004842 | molecular_function | ubiquitin-protein transferase activity |
C | 0005515 | molecular_function | protein binding |
C | 0005524 | molecular_function | ATP binding |
C | 0005634 | cellular_component | nucleus |
C | 0005654 | cellular_component | nucleoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
C | 0016567 | biological_process | protein ubiquitination |
C | 0016740 | molecular_function | transferase activity |
C | 0019787 | molecular_function | ubiquitin-like protein transferase activity |
C | 0031625 | molecular_function | ubiquitin protein ligase binding |
C | 0032991 | cellular_component | protein-containing complex |
C | 0036211 | biological_process | protein modification process |
C | 0051865 | biological_process | protein autoubiquitination |
C | 0061630 | molecular_function | ubiquitin protein ligase activity |
C | 0061631 | molecular_function | ubiquitin conjugating enzyme activity |
C | 0070062 | cellular_component | extracellular exosome |
C | 0070936 | biological_process | protein K48-linked ubiquitination |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue ZN A 701 |
Chain | Residue |
A | CYS571 |
A | CYS574 |
A | CYS592 |
A | CYS595 |
site_id | AC2 |
Number of Residues | 4 |
Details | binding site for residue ZN A 702 |
Chain | Residue |
A | CYS586 |
A | HIS588 |
A | CYS602 |
A | CYS605 |
Functional Information from PROSITE/UniProt
site_id | PS00299 |
Number of Residues | 26 |
Details | UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD |
Chain | Residue | Details |
B | LYS27-ASP52 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | ACT_SITE: Glycyl thioester intermediate => ECO:0000255|PROSITE-ProRule:PRU00388, ECO:0000255|PROSITE-ProRule:PRU10133 |
Chain | Residue | Details |
C | LYS85 | |
D | GLY-1 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | CROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) |
Chain | Residue | Details |
B | GLY-1 | |
D | GLY-1 |