6FYY
Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000028 | biological_process | ribosomal small subunit assembly |
| A | 0000447 | biological_process | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| A | 0000461 | biological_process | endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| A | 0003735 | molecular_function | structural constituent of ribosome |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005840 | cellular_component | ribosome |
| A | 0006412 | biological_process | translation |
| A | 0015935 | cellular_component | small ribosomal subunit |
| A | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| A | 1990904 | cellular_component | ribonucleoprotein complex |
| B | 0003735 | molecular_function | structural constituent of ribosome |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005840 | cellular_component | ribosome |
| B | 0006412 | biological_process | translation |
| B | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| C | 0003723 | molecular_function | RNA binding |
| C | 0003735 | molecular_function | structural constituent of ribosome |
| C | 0005840 | cellular_component | ribosome |
| C | 0006412 | biological_process | translation |
| C | 0015935 | cellular_component | small ribosomal subunit |
| C | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| C | 1990904 | cellular_component | ribonucleoprotein complex |
| D | 0003723 | molecular_function | RNA binding |
| D | 0003735 | molecular_function | structural constituent of ribosome |
| D | 0005634 | cellular_component | nucleus |
| D | 0005840 | cellular_component | ribosome |
| D | 0006412 | biological_process | translation |
| D | 0015935 | cellular_component | small ribosomal subunit |
| D | 0022626 | cellular_component | cytosolic ribosome |
| D | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| D | 1990904 | cellular_component | ribonucleoprotein complex |
| E | 0002181 | biological_process | cytoplasmic translation |
| E | 0003723 | molecular_function | RNA binding |
| E | 0003735 | molecular_function | structural constituent of ribosome |
| E | 0005840 | cellular_component | ribosome |
| E | 0006412 | biological_process | translation |
| E | 0019843 | molecular_function | rRNA binding |
| E | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| E | 1990904 | cellular_component | ribonucleoprotein complex |
| F | 0003723 | molecular_function | RNA binding |
| F | 0003735 | molecular_function | structural constituent of ribosome |
| F | 0005840 | cellular_component | ribosome |
| F | 0006412 | biological_process | translation |
| F | 0015935 | cellular_component | small ribosomal subunit |
| F | 1990904 | cellular_component | ribonucleoprotein complex |
| G | 0003735 | molecular_function | structural constituent of ribosome |
| G | 0005840 | cellular_component | ribosome |
| G | 0006412 | biological_process | translation |
| G | 1990904 | cellular_component | ribonucleoprotein complex |
| H | 0003735 | molecular_function | structural constituent of ribosome |
| H | 0005840 | cellular_component | ribosome |
| H | 0006364 | biological_process | rRNA processing |
| H | 0006412 | biological_process | translation |
| H | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| H | 0030686 | cellular_component | 90S preribosome |
| H | 0032040 | cellular_component | small-subunit processome |
| H | 0042274 | biological_process | ribosomal small subunit biogenesis |
| H | 1990904 | cellular_component | ribonucleoprotein complex |
| I | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| I | 0003735 | molecular_function | structural constituent of ribosome |
| I | 0005840 | cellular_component | ribosome |
| I | 0006412 | biological_process | translation |
| I | 1990904 | cellular_component | ribonucleoprotein complex |
| J | 0003723 | molecular_function | RNA binding |
| J | 0003735 | molecular_function | structural constituent of ribosome |
| J | 0005840 | cellular_component | ribosome |
| J | 0006412 | biological_process | translation |
| J | 0015935 | cellular_component | small ribosomal subunit |
| J | 0019843 | molecular_function | rRNA binding |
| J | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| J | 0032040 | cellular_component | small-subunit processome |
| J | 0042274 | biological_process | ribosomal small subunit biogenesis |
| J | 1990904 | cellular_component | ribonucleoprotein complex |
| K | 0000054 | biological_process | ribosomal subunit export from nucleus |
| K | 0003723 | molecular_function | RNA binding |
| K | 0003735 | molecular_function | structural constituent of ribosome |
| K | 0005737 | cellular_component | cytoplasm |
| K | 0005840 | cellular_component | ribosome |
| K | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| K | 0034198 | biological_process | cellular response to amino acid starvation |
| K | 1990904 | cellular_component | ribonucleoprotein complex |
| L | 0000028 | biological_process | ribosomal small subunit assembly |
| L | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| L | 0003735 | molecular_function | structural constituent of ribosome |
| L | 0005840 | cellular_component | ribosome |
| L | 0006412 | biological_process | translation |
| L | 0019843 | molecular_function | rRNA binding |
| L | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| L | 1990904 | cellular_component | ribonucleoprotein complex |
| M | 0003735 | molecular_function | structural constituent of ribosome |
| M | 0005840 | cellular_component | ribosome |
| M | 0006412 | biological_process | translation |
| M | 1990904 | cellular_component | ribonucleoprotein complex |
| N | 0003735 | molecular_function | structural constituent of ribosome |
| N | 0005730 | cellular_component | nucleolus |
| N | 0005840 | cellular_component | ribosome |
| N | 0006412 | biological_process | translation |
| N | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| N | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| N | 1990904 | cellular_component | ribonucleoprotein complex |
| O | 0000028 | biological_process | ribosomal small subunit assembly |
| O | 0003735 | molecular_function | structural constituent of ribosome |
| O | 0005840 | cellular_component | ribosome |
| O | 0006412 | biological_process | translation |
| O | 0032040 | cellular_component | small-subunit processome |
| O | 1990904 | cellular_component | ribonucleoprotein complex |
| P | 0000028 | biological_process | ribosomal small subunit assembly |
| P | 0003723 | molecular_function | RNA binding |
| P | 0003735 | molecular_function | structural constituent of ribosome |
| P | 0005840 | cellular_component | ribosome |
| P | 0006412 | biological_process | translation |
| P | 0015935 | cellular_component | small ribosomal subunit |
| P | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| P | 1990904 | cellular_component | ribonucleoprotein complex |
| Q | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| Q | 0003723 | molecular_function | RNA binding |
| Q | 0003735 | molecular_function | structural constituent of ribosome |
| Q | 0005840 | cellular_component | ribosome |
| Q | 0006412 | biological_process | translation |
| Q | 0015935 | cellular_component | small ribosomal subunit |
| Q | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| Q | 1990904 | cellular_component | ribonucleoprotein complex |
| R | 0000028 | biological_process | ribosomal small subunit assembly |
| R | 0003735 | molecular_function | structural constituent of ribosome |
| R | 0005829 | cellular_component | cytosol |
| R | 0005840 | cellular_component | ribosome |
| R | 0006412 | biological_process | translation |
| R | 1990904 | cellular_component | ribonucleoprotein complex |
| S | 0000054 | biological_process | ribosomal subunit export from nucleus |
| S | 0000447 | biological_process | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| S | 0003676 | molecular_function | nucleic acid binding |
| S | 0003723 | molecular_function | RNA binding |
| S | 0003735 | molecular_function | structural constituent of ribosome |
| S | 0005737 | cellular_component | cytoplasm |
| S | 0005829 | cellular_component | cytosol |
| S | 0005840 | cellular_component | ribosome |
| S | 0006412 | biological_process | translation |
| S | 0015935 | cellular_component | small ribosomal subunit |
| S | 1990904 | cellular_component | ribonucleoprotein complex |
| T | 0000028 | biological_process | ribosomal small subunit assembly |
| T | 0000054 | biological_process | ribosomal subunit export from nucleus |
| T | 0003723 | molecular_function | RNA binding |
| T | 0003735 | molecular_function | structural constituent of ribosome |
| T | 0005840 | cellular_component | ribosome |
| T | 0006412 | biological_process | translation |
| T | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| T | 0042274 | biological_process | ribosomal small subunit biogenesis |
| T | 1990904 | cellular_component | ribonucleoprotein complex |
| U | 0003735 | molecular_function | structural constituent of ribosome |
| U | 0005840 | cellular_component | ribosome |
| U | 0006412 | biological_process | translation |
| U | 0015935 | cellular_component | small ribosomal subunit |
| U | 1990904 | cellular_component | ribonucleoprotein complex |
| V | 0000447 | biological_process | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| V | 0000461 | biological_process | endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| V | 0003735 | molecular_function | structural constituent of ribosome |
| V | 0005737 | cellular_component | cytoplasm |
| V | 0005840 | cellular_component | ribosome |
| V | 0006364 | biological_process | rRNA processing |
| V | 0006412 | biological_process | translation |
| V | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| V | 1990904 | cellular_component | ribonucleoprotein complex |
| W | 0003735 | molecular_function | structural constituent of ribosome |
| W | 0005840 | cellular_component | ribosome |
| W | 0006412 | biological_process | translation |
| W | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| W | 1990904 | cellular_component | ribonucleoprotein complex |
| X | 0003735 | molecular_function | structural constituent of ribosome |
| X | 0005840 | cellular_component | ribosome |
| X | 0006412 | biological_process | translation |
| X | 0015935 | cellular_component | small ribosomal subunit |
| X | 1990904 | cellular_component | ribonucleoprotein complex |
| Y | 0003735 | molecular_function | structural constituent of ribosome |
| Y | 0005840 | cellular_component | ribosome |
| Y | 0006412 | biological_process | translation |
| Y | 1990904 | cellular_component | ribonucleoprotein complex |
| Z | 0005840 | cellular_component | ribosome |
| Z | 1990904 | cellular_component | ribonucleoprotein complex |
| a | 0000054 | biological_process | ribosomal subunit export from nucleus |
| a | 0000463 | biological_process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| a | 0003729 | molecular_function | mRNA binding |
| a | 0003735 | molecular_function | structural constituent of ribosome |
| a | 0005840 | cellular_component | ribosome |
| a | 0006412 | biological_process | translation |
| a | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| a | 0030686 | cellular_component | 90S preribosome |
| a | 1990904 | cellular_component | ribonucleoprotein complex |
| b | 0000028 | biological_process | ribosomal small subunit assembly |
| b | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| b | 0003735 | molecular_function | structural constituent of ribosome |
| b | 0005840 | cellular_component | ribosome |
| b | 0006412 | biological_process | translation |
| b | 0008270 | molecular_function | zinc ion binding |
| b | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| b | 0046872 | molecular_function | metal ion binding |
| b | 1990904 | cellular_component | ribonucleoprotein complex |
| c | 0000028 | biological_process | ribosomal small subunit assembly |
| c | 0003735 | molecular_function | structural constituent of ribosome |
| c | 0005840 | cellular_component | ribosome |
| c | 0006412 | biological_process | translation |
| c | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| c | 0030490 | biological_process | maturation of SSU-rRNA |
| c | 1990904 | cellular_component | ribonucleoprotein complex |
| d | 0002181 | biological_process | cytoplasmic translation |
| d | 0003735 | molecular_function | structural constituent of ribosome |
| d | 0005840 | cellular_component | ribosome |
| d | 0006412 | biological_process | translation |
| d | 0008270 | molecular_function | zinc ion binding |
| d | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| d | 1990904 | cellular_component | ribonucleoprotein complex |
| e | 0003735 | molecular_function | structural constituent of ribosome |
| e | 0005829 | cellular_component | cytosol |
| e | 0005840 | cellular_component | ribosome |
| e | 0006412 | biological_process | translation |
| e | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| e | 1990904 | cellular_component | ribonucleoprotein complex |
| f | 0003735 | molecular_function | structural constituent of ribosome |
| f | 0005634 | cellular_component | nucleus |
| f | 0005737 | cellular_component | cytoplasm |
| f | 0005840 | cellular_component | ribosome |
| f | 0006412 | biological_process | translation |
| f | 0008270 | molecular_function | zinc ion binding |
| f | 0031386 | molecular_function | protein tag activity |
| f | 0046872 | molecular_function | metal ion binding |
| f | 1990904 | cellular_component | ribonucleoprotein complex |
| g | 0005092 | molecular_function | GDP-dissociation inhibitor activity |
| g | 0006417 | biological_process | regulation of translation |
| g | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
| g | 0043022 | molecular_function | ribosome binding |
| g | 0045182 | molecular_function | translation regulator activity |
| h | 0002181 | biological_process | cytoplasmic translation |
| h | 0003735 | molecular_function | structural constituent of ribosome |
| h | 0005737 | cellular_component | cytoplasm |
| h | 0005829 | cellular_component | cytosol |
| h | 0005840 | cellular_component | ribosome |
| h | 0006412 | biological_process | translation |
| h | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| h | 1990904 | cellular_component | ribonucleoprotein complex |
| i | 0001677 | biological_process | formation of translation initiation ternary complex |
| i | 0001731 | biological_process | formation of translation preinitiation complex |
| i | 0001732 | biological_process | formation of cytoplasmic translation initiation complex |
| i | 0002188 | biological_process | translation reinitiation |
| i | 0003723 | molecular_function | RNA binding |
| i | 0003725 | molecular_function | double-stranded RNA binding |
| i | 0003743 | molecular_function | translation initiation factor activity |
| i | 0005515 | molecular_function | protein binding |
| i | 0005737 | cellular_component | cytoplasm |
| i | 0006412 | biological_process | translation |
| i | 0006413 | biological_process | translational initiation |
| i | 0010494 | cellular_component | cytoplasmic stress granule |
| i | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
| i | 0019901 | molecular_function | protein kinase binding |
| i | 0031369 | molecular_function | translation initiation factor binding |
| i | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
| i | 0043024 | molecular_function | ribosomal small subunit binding |
| j | 0001731 | biological_process | formation of translation preinitiation complex |
| j | 0003676 | molecular_function | nucleic acid binding |
| j | 0003723 | molecular_function | RNA binding |
| j | 0003743 | molecular_function | translation initiation factor activity |
| j | 0005515 | molecular_function | protein binding |
| j | 0005525 | molecular_function | GTP binding |
| j | 0005737 | cellular_component | cytoplasm |
| j | 0005829 | cellular_component | cytosol |
| j | 0005840 | cellular_component | ribosome |
| j | 0005850 | cellular_component | eukaryotic translation initiation factor 2 complex |
| j | 0006412 | biological_process | translation |
| j | 0006413 | biological_process | translational initiation |
| j | 0010494 | cellular_component | cytoplasmic stress granule |
| j | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
| j | 0043022 | molecular_function | ribosome binding |
| j | 0043614 | cellular_component | multi-eIF complex |
| j | 1990856 | molecular_function | methionyl-initiator methionine tRNA binding |
| k | 0000049 | molecular_function | tRNA binding |
| k | 0000166 | molecular_function | nucleotide binding |
| k | 0001731 | biological_process | formation of translation preinitiation complex |
| k | 0003743 | molecular_function | translation initiation factor activity |
| k | 0003924 | molecular_function | GTPase activity |
| k | 0005515 | molecular_function | protein binding |
| k | 0005525 | molecular_function | GTP binding |
| k | 0005829 | cellular_component | cytosol |
| k | 0005840 | cellular_component | ribosome |
| k | 0005850 | cellular_component | eukaryotic translation initiation factor 2 complex |
| k | 0006412 | biological_process | translation |
| k | 0006413 | biological_process | translational initiation |
| k | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
| k | 0016787 | molecular_function | hydrolase activity |
| k | 0031369 | molecular_function | translation initiation factor binding |
| k | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
| k | 0043614 | cellular_component | multi-eIF complex |
| k | 0045903 | biological_process | positive regulation of translational fidelity |
| k | 1990856 | molecular_function | methionyl-initiator methionine tRNA binding |
| l | 0001731 | biological_process | formation of translation preinitiation complex |
| l | 0003729 | molecular_function | mRNA binding |
| l | 0003743 | molecular_function | translation initiation factor activity |
| l | 0005515 | molecular_function | protein binding |
| l | 0005525 | molecular_function | GTP binding |
| l | 0005829 | cellular_component | cytosol |
| l | 0005840 | cellular_component | ribosome |
| l | 0005850 | cellular_component | eukaryotic translation initiation factor 2 complex |
| l | 0006412 | biological_process | translation |
| l | 0006413 | biological_process | translational initiation |
| l | 0008270 | molecular_function | zinc ion binding |
| l | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
| l | 0031369 | molecular_function | translation initiation factor binding |
| l | 0043614 | cellular_component | multi-eIF complex |
| l | 0046872 | molecular_function | metal ion binding |
| l | 1990856 | molecular_function | methionyl-initiator methionine tRNA binding |
| m | 0000166 | molecular_function | nucleotide binding |
| m | 0001732 | biological_process | formation of cytoplasmic translation initiation complex |
| m | 0003743 | molecular_function | translation initiation factor activity |
| m | 0005092 | molecular_function | GDP-dissociation inhibitor activity |
| m | 0005096 | molecular_function | GTPase activator activity |
| m | 0005515 | molecular_function | protein binding |
| m | 0005525 | molecular_function | GTP binding |
| m | 0005829 | cellular_component | cytosol |
| m | 0006412 | biological_process | translation |
| m | 0006413 | biological_process | translational initiation |
| m | 0006446 | biological_process | regulation of translational initiation |
| m | 0008270 | molecular_function | zinc ion binding |
| m | 0031369 | molecular_function | translation initiation factor binding |
| m | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
| m | 0042256 | biological_process | cytosolic ribosome assembly |
| m | 0043614 | cellular_component | multi-eIF complex |
| m | 0045947 | biological_process | negative regulation of translational initiation |
| m | 0071074 | molecular_function | eukaryotic initiation factor eIF2 binding |
| o | 0000131 | cellular_component | incipient cellular bud site |
| o | 0001732 | biological_process | formation of cytoplasmic translation initiation complex |
| o | 0002183 | biological_process | cytoplasmic translational initiation |
| o | 0002188 | biological_process | translation reinitiation |
| o | 0003723 | molecular_function | RNA binding |
| o | 0003729 | molecular_function | mRNA binding |
| o | 0003743 | molecular_function | translation initiation factor activity |
| o | 0005515 | molecular_function | protein binding |
| o | 0005737 | cellular_component | cytoplasm |
| o | 0005852 | cellular_component | eukaryotic translation initiation factor 3 complex |
| o | 0006412 | biological_process | translation |
| o | 0006413 | biological_process | translational initiation |
| o | 0010494 | cellular_component | cytoplasmic stress granule |
| o | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
| o | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
| o | 0043614 | cellular_component | multi-eIF complex |
| o | 0071540 | cellular_component | eukaryotic translation initiation factor 3 complex, eIF3e |
| o | 0071541 | cellular_component | eukaryotic translation initiation factor 3 complex, eIF3m |
| p | 0001732 | biological_process | formation of cytoplasmic translation initiation complex |
| p | 0002183 | biological_process | cytoplasmic translational initiation |
| p | 0003676 | molecular_function | nucleic acid binding |
| p | 0003723 | molecular_function | RNA binding |
| p | 0003743 | molecular_function | translation initiation factor activity |
| p | 0005515 | molecular_function | protein binding |
| p | 0005737 | cellular_component | cytoplasm |
| p | 0005852 | cellular_component | eukaryotic translation initiation factor 3 complex |
| p | 0006412 | biological_process | translation |
| p | 0006413 | biological_process | translational initiation |
| p | 0010494 | cellular_component | cytoplasmic stress granule |
| p | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
| p | 0031369 | molecular_function | translation initiation factor binding |
| p | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
| p | 0042802 | molecular_function | identical protein binding |
| p | 0043614 | cellular_component | multi-eIF complex |
| q | 0003723 | molecular_function | RNA binding |
| q | 0003743 | molecular_function | translation initiation factor activity |
| q | 0005852 | cellular_component | eukaryotic translation initiation factor 3 complex |
| q | 0006413 | biological_process | translational initiation |
| q | 0031369 | molecular_function | translation initiation factor binding |
| r | 0001732 | biological_process | formation of cytoplasmic translation initiation complex |
| r | 0002183 | biological_process | cytoplasmic translational initiation |
| r | 0003676 | molecular_function | nucleic acid binding |
| r | 0003723 | molecular_function | RNA binding |
| r | 0003743 | molecular_function | translation initiation factor activity |
| r | 0005737 | cellular_component | cytoplasm |
| r | 0005852 | cellular_component | eukaryotic translation initiation factor 3 complex |
| r | 0006412 | biological_process | translation |
| r | 0006413 | biological_process | translational initiation |
| r | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
| r | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
| s | 0001732 | biological_process | formation of cytoplasmic translation initiation complex |
| s | 0002183 | biological_process | cytoplasmic translational initiation |
| s | 0003723 | molecular_function | RNA binding |
| s | 0003743 | molecular_function | translation initiation factor activity |
| s | 0005737 | cellular_component | cytoplasm |
| s | 0005852 | cellular_component | eukaryotic translation initiation factor 3 complex |
| s | 0006412 | biological_process | translation |
| s | 0006413 | biological_process | translational initiation |
| s | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
| s | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
| s | 0071541 | cellular_component | eukaryotic translation initiation factor 3 complex, eIF3m |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1801 |
| Chain | Residue |
| 2 | A359 |
| 2 | G361 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1802 |
| Chain | Residue |
| 2 | A93 |
| 2 | G95 |
| 2 | G402 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1803 |
| Chain | Residue |
| 2 | G551 |
| 2 | C553 |
| 2 | A554 |
| 2 | A555 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1804 |
| Chain | Residue |
| 2 | A100 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1805 |
| Chain | Residue |
| 2 | G623 |
| 2 | A1024 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1807 |
| Chain | Residue |
| 2 | C49 |
| 2 | A424 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1809 |
| Chain | Residue |
| 2 | G1329 |
| 2 | C1418 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1810 |
| Chain | Residue |
| 2 | G10 |
| 2 | A11 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1811 |
| Chain | Residue |
| 2 | A928 |
| site_id | AD1 |
| Number of Residues | 5 |
| Details | binding site for residue MG 2 1812 |
| Chain | Residue |
| 2 | A1761 |
| 2 | G1765 |
| 2 | G1766 |
| 2 | U1768 |
| 2 | U1769 |
| site_id | AD2 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1813 |
| Chain | Residue |
| 2 | U546 |
| 2 | G547 |
| site_id | AD3 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1814 |
| Chain | Residue |
| 2 | A400 |
| site_id | AD4 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1815 |
| Chain | Residue |
| 2 | G16 |
| 2 | A619 |
| site_id | AD5 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1816 |
| Chain | Residue |
| 2 | G361 |
| 2 | A377 |
| 2 | U378 |
| site_id | AD6 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1817 |
| Chain | Residue |
| 2 | A28 |
| site_id | AD7 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1818 |
| Chain | Residue |
| 2 | G370 |
| 2 | A604 |
| 2 | G606 |
| site_id | AD8 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1819 |
| Chain | Residue |
| 2 | U995 |
| 2 | U1003 |
| site_id | AD9 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1820 |
| Chain | Residue |
| 2 | C426 |
| 2 | G428 |
| site_id | AE1 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1821 |
| Chain | Residue |
| 2 | A43 |
| 2 | U44 |
| 2 | A47 |
| site_id | AE2 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1822 |
| Chain | Residue |
| 2 | U1759 |
| 2 | A1760 |
| 2 | A1761 |
| 2 | G1766 |
| site_id | AE3 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1823 |
| Chain | Residue |
| 2 | A618 |
| 2 | A619 |
| 2 | A620 |
| site_id | AE4 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1824 |
| Chain | Residue |
| 2 | G561 |
| site_id | AE5 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1825 |
| Chain | Residue |
| 2 | A618 |
| site_id | AE6 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1826 |
| Chain | Residue |
| 2 | G1327 |
| 2 | A1328 |
| 2 | G1329 |
| site_id | AE7 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1827 |
| Chain | Residue |
| 2 | A622 |
| site_id | AE8 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1828 |
| Chain | Residue |
| 2 | A100 |
| 2 | U101 |
| 2 | U102 |
| 2 | C360 |
| site_id | AE9 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1829 |
| Chain | Residue |
| 2 | G20 |
| site_id | AF1 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1830 |
| Chain | Residue |
| 2 | G1111 |
| 2 | A1112 |
| site_id | AF2 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1831 |
| Chain | Residue |
| 2 | U1768 |
| site_id | AF3 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1832 |
| Chain | Residue |
| 2 | G95 |
| site_id | AF4 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1833 |
| Chain | Residue |
| 2 | G1724 |
| 2 | G1725 |
| site_id | AF5 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1834 |
| Chain | Residue |
| 2 | G1627 |
| 2 | U1628 |
| 2 | G1791 |
| 2 | A1792 |
| site_id | AF6 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1835 |
| Chain | Residue |
| 2 | A62 |
| 2 | U82 |
| site_id | AF7 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1836 |
| Chain | Residue |
| 2 | G1647 |
| site_id | AF8 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1837 |
| Chain | Residue |
| 2 | A459 |
| 2 | G460 |
| site_id | AF9 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1838 |
| Chain | Residue |
| 2 | G466 |
| site_id | AG1 |
| Number of Residues | 5 |
| Details | binding site for residue MG 2 1839 |
| Chain | Residue |
| 2 | A622 |
| 2 | G623 |
| 2 | C624 |
| 2 | C1027 |
| 2 | U1030 |
| site_id | AG2 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1840 |
| Chain | Residue |
| 2 | G984 |
| 2 | G1013 |
| site_id | AG3 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1844 |
| Chain | Residue |
| 2 | G1046 |
| site_id | AG4 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1846 |
| Chain | Residue |
| 2 | G403 |
| 2 | C404 |
| 2 | G421 |
| site_id | AG5 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1847 |
| Chain | Residue |
| 2 | U1302 |
| site_id | AG6 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1848 |
| Chain | Residue |
| 2 | A978 |
| 2 | U1014 |
| site_id | AG7 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1849 |
| Chain | Residue |
| 2 | U88 |
| 2 | G89 |
| site_id | AG8 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1850 |
| Chain | Residue |
| 2 | A760 |
| 2 | G761 |
| site_id | AG9 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1851 |
| Chain | Residue |
| 2 | A1138 |
| 2 | G1139 |
| site_id | AH1 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1852 |
| Chain | Residue |
| 2 | G844 |
| 2 | C826 |
| 2 | A843 |
| site_id | AH2 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1853 |
| Chain | Residue |
| 2 | A514 |
| 2 | C530 |
| site_id | AH3 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1854 |
| Chain | Residue |
| 2 | MG1855 |
| site_id | AH4 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1855 |
| Chain | Residue |
| 2 | G1293 |
| 2 | G1294 |
| 2 | MG1854 |
| site_id | AH5 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1856 |
| Chain | Residue |
| 2 | G937 |
| site_id | AH6 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1857 |
| Chain | Residue |
| 2 | U988 |
| 2 | G1010 |
| site_id | AH7 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1858 |
| Chain | Residue |
| 2 | A212 |
| site_id | AH8 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1859 |
| Chain | Residue |
| 2 | G1538 |
| 2 | G1539 |
| 2 | G1540 |
| T | GLU44 |
| site_id | AH9 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1863 |
| Chain | Residue |
| 2 | G990 |
| 2 | G1010 |
| site_id | AI1 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1864 |
| Chain | Residue |
| 2 | G1118 |
| 2 | U1119 |
| 2 | G1125 |
| 2 | G1126 |
| site_id | AI2 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1865 |
| Chain | Residue |
| 2 | C1161 |
| site_id | AI3 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1866 |
| Chain | Residue |
| 2 | G924 |
| site_id | AI4 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1867 |
| Chain | Residue |
| 2 | G1392 |
| site_id | AI5 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1868 |
| Chain | Residue |
| 2 | C1158 |
| 2 | U1282 |
| site_id | AI6 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1869 |
| Chain | Residue |
| 2 | A1467 |
| 2 | G1539 |
| T | ASN85 |
| site_id | AI7 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1871 |
| Chain | Residue |
| 2 | C1455 |
| site_id | AI8 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1872 |
| Chain | Residue |
| 2 | G1199 |
| 2 | G1200 |
| 2 | A1598 |
| site_id | AI9 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1873 |
| Chain | Residue |
| 2 | G1269 |
| site_id | AJ1 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1874 |
| Chain | Residue |
| 2 | A1195 |
| 2 | C1196 |
| 2 | C1463 |
| site_id | AJ2 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1875 |
| Chain | Residue |
| 2 | G1267 |
| 2 | U1268 |
| 2 | U1432 |
| 2 | G1433 |
| site_id | AJ3 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1876 |
| Chain | Residue |
| 2 | G1272 |
| 2 | C1273 |
| 2 | 2MG1426 |
| site_id | AJ4 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1877 |
| Chain | Residue |
| 2 | G1537 |
| 2 | G1538 |
| 2 | G1539 |
| site_id | AJ5 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1878 |
| Chain | Residue |
| 2 | A1481 |
| 2 | G1482 |
| 2 | U1520 |
| site_id | AJ6 |
| Number of Residues | 5 |
| Details | binding site for residue MG 2 1879 |
| Chain | Residue |
| 2 | C1273 |
| 2 | 2MG1426 |
| 2 | G1427 |
| i | ARG13 |
| i | ASN17 |
| site_id | AJ7 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1880 |
| Chain | Residue |
| 2 | A1201 |
| 2 | A1202 |
| 2 | C1597 |
| site_id | AJ8 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1882 |
| Chain | Residue |
| 2 | U628 |
| 2 | A629 |
| site_id | AJ9 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1883 |
| Chain | Residue |
| 2 | U1184 |
| site_id | AK1 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1884 |
| Chain | Residue |
| 2 | C1158 |
| 2 | A1159 |
| 2 | U1577 |
| Q | TYR142 |
| site_id | AK2 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1885 |
| Chain | Residue |
| 2 | G1169 |
| 2 | C1461 |
| site_id | AK3 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1886 |
| Chain | Residue |
| 2 | G1168 |
| 2 | G1169 |
| site_id | AK4 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1887 |
| Chain | Residue |
| 2 | G1166 |
| 2 | U1167 |
| site_id | AK5 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1888 |
| Chain | Residue |
| 2 | A1467 |
| 2 | C1587 |
| site_id | AK6 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1890 |
| Chain | Residue |
| 2 | C1479 |
| 2 | A1522 |
| 2 | A1523 |
| T | LEU79 |
| site_id | AK7 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1891 |
| Chain | Residue |
| 2 | U1767 |
| site_id | AK8 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1892 |
| Chain | Residue |
| 2 | G1766 |
| 2 | U1767 |
| 3 | A27 |
| site_id | AK9 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1893 |
| Chain | Residue |
| 2 | G1758 |
| m | ASN30 |
| site_id | AL1 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1896 |
| Chain | Residue |
| 2 | G1478 |
| site_id | AL2 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1897 |
| Chain | Residue |
| 2 | U1793 |
| 2 | A1795 |
| a | LYS34 |
| site_id | AL3 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1898 |
| Chain | Residue |
| 2 | C565 |
| X | GLU60 |
| X | ILE68 |
| i | ARG62 |
| site_id | AL4 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1899 |
| Chain | Residue |
| 2 | A1631 |
| site_id | AL5 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1900 |
| Chain | Residue |
| 2 | C423 |
| site_id | AL6 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1901 |
| Chain | Residue |
| 2 | G91 |
| 2 | G395 |
| 2 | A396 |
| 2 | G397 |
| site_id | AL7 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1902 |
| Chain | Residue |
| 2 | C249 |
| 2 | A250 |
| site_id | AL8 |
| Number of Residues | 1 |
| Details | binding site for residue MG 2 1903 |
| Chain | Residue |
| 2 | C401 |
| site_id | AL9 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1904 |
| Chain | Residue |
| 2 | A474 |
| 2 | A543 |
| 2 | A544 |
| site_id | AM1 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1905 |
| Chain | Residue |
| 2 | A634 |
| 2 | A635 |
| 2 | A805 |
| site_id | AM2 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1906 |
| Chain | Residue |
| 2 | A756 |
| 2 | A792 |
| site_id | AM3 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1907 |
| Chain | Residue |
| 2 | A861 |
| 2 | A862 |
| site_id | AM4 |
| Number of Residues | 5 |
| Details | binding site for residue MG 2 1908 |
| Chain | Residue |
| 2 | G894 |
| 2 | U895 |
| 2 | G913 |
| 2 | A914 |
| 2 | U916 |
| site_id | AM5 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 1909 |
| Chain | Residue |
| 2 | A969 |
| 2 | A970 |
| 2 | G971 |
| site_id | AM6 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1910 |
| Chain | Residue |
| 2 | G1108 |
| 2 | G1109 |
| site_id | AM7 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1911 |
| Chain | Residue |
| 2 | C1204 |
| 2 | G1451 |
| site_id | AM8 |
| Number of Residues | 4 |
| Details | binding site for residue MG 2 1912 |
| Chain | Residue |
| 2 | A1203 |
| 2 | C1204 |
| 2 | U1205 |
| 2 | G1453 |
| site_id | AM9 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1913 |
| Chain | Residue |
| 2 | U1376 |
| 2 | C1377 |
| site_id | AN1 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1914 |
| Chain | Residue |
| 2 | G1446 |
| 2 | U1447 |
| site_id | AN2 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1915 |
| Chain | Residue |
| 2 | C1157 |
| 2 | G1614 |
| site_id | AN3 |
| Number of Residues | 2 |
| Details | binding site for residue MG 2 1916 |
| Chain | Residue |
| 2 | C1283 |
| 2 | A1420 |
| site_id | AN4 |
| Number of Residues | 4 |
| Details | binding site for residue ZN a 500 |
| Chain | Residue |
| a | CYS23 |
| a | CYS26 |
| a | CYS74 |
| a | CYS77 |
| site_id | AN5 |
| Number of Residues | 4 |
| Details | binding site for residue ZN b 101 |
| Chain | Residue |
| b | CYS37 |
| b | CYS56 |
| b | CYS59 |
| b | THR61 |
| site_id | AN6 |
| Number of Residues | 5 |
| Details | binding site for residue ZN f 501 |
| Chain | Residue |
| f | CYS121 |
| f | ASN123 |
| f | CYS124 |
| f | CYS139 |
| f | CYS142 |
| site_id | AN7 |
| Number of Residues | 9 |
| Details | binding site for residue MET k 601 |
| Chain | Residue |
| 1 | A76 |
| k | TYR142 |
| k | ASN144 |
| k | PHE321 |
| k | PHE381 |
| k | ALA382 |
| k | GLU383 |
| k | LEU395 |
| k | GLY397 |
| site_id | AN8 |
| Number of Residues | 2 |
| Details | binding site for residue MG k 602 |
| Chain | Residue |
| k | THR137 |
| k | GLY141 |
| site_id | AN9 |
| Number of Residues | 15 |
| Details | binding site for residue GCP k 603 |
| Chain | Residue |
| k | HIS108 |
| k | VAL109 |
| k | ALA110 |
| k | HIS111 |
| k | GLY112 |
| k | LYS113 |
| k | THR115 |
| k | ILE136 |
| k | GLY196 |
| k | ASN249 |
| k | ALA285 |
| k | GLN286 |
| l | THR238 |
| l | CYS239 |
| l | CYS262 |
| site_id | AO1 |
| Number of Residues | 4 |
| Details | binding site for residue ZN l 301 |
| Chain | Residue |
| l | CYS236 |
| l | SER241 |
| l | THR244 |
| l | CYS259 |
| site_id | AO2 |
| Number of Residues | 4 |
| Details | binding site for residue ZN m 501 |
| Chain | Residue |
| m | CYS99 |
| m | CYS124 |
| m | LYS126 |
| m | THR128 |
| site_id | AO3 |
| Number of Residues | 9 |
| Details | binding site for residues 1MG 1 9 and 2MG 1 10 |
| Chain | Residue |
| 1 | U8 |
| 1 | C11 |
| 1 | G22 |
| 1 | C23 |
| 1 | C25 |
| 1 | M2G26 |
| 1 | U45 |
| 1 | 7MG46 |
| 1 | H2U47 |
| site_id | AO4 |
| Number of Residues | 5 |
| Details | binding site for residues 7MG 1 46 and H2U 1 47 |
| Chain | Residue |
| 1 | 1MG9 |
| 1 | A21 |
| 1 | U45 |
| 1 | 5MC48 |
| 1 | U50 |
| site_id | AO5 |
| Number of Residues | 11 |
| Details | binding site for residues H2U 1 47 and 5MC 1 48 |
| Chain | Residue |
| 1 | G7 |
| 1 | U8 |
| 1 | 1MG9 |
| 1 | A14 |
| 1 | G15 |
| 1 | A21 |
| 1 | G22 |
| 1 | 7MG46 |
| 1 | 5MC49 |
| 1 | U50 |
| 1 | A59 |
| site_id | AO6 |
| Number of Residues | 12 |
| Details | binding site for residues 5MC 1 48 and 5MC 1 49 |
| Chain | Residue |
| 1 | G7 |
| 1 | U8 |
| 1 | A14 |
| 1 | G15 |
| 1 | A21 |
| 1 | G22 |
| 1 | 7MG46 |
| 1 | H2U47 |
| 1 | U50 |
| 1 | A59 |
| 1 | G65 |
| 1 | C66 |
Functional Information from PROSITE/UniProt
| site_id | PS00052 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmngrnnGKKlkavrIVkhT |
| Chain | Residue | Details |
| F | GLU93-THR119 |
| site_id | PS00053 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAH |
| Chain | Residue | Details |
| W | GLY100-HIS117 |
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GLrIgrieDvTPvPSD |
| Chain | Residue | Details |
| O | LEU102-ASP124 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR |
| Chain | Residue | Details |
| X | LYS62-ARG69 |
| site_id | PS00056 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgQcRPIS |
| Chain | Residue | Details |
| L | GLY120-SER132 |
| site_id | PS00299 |
| Number of Residues | 26 |
| Details | UBIQUITIN_1 Ubiquitin domain signature. KskIqDkegIPpdqQrLIFaGkqleD |
| Chain | Residue | Details |
| f | LYS27-ASP52 |
| site_id | PS00323 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKvfnqveIrpemVGhyLGEFsiT |
| Chain | Residue | Details |
| P | ASN98-THR122 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvSQvyAirqAiAKGL |
| Chain | Residue | Details |
| Q | GLY71-LEU89 |
| site_id | PS00362 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY |
| Chain | Residue | Details |
| N | VAL98-TYR128 |
| site_id | PS00528 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPhhWmLdK |
| Chain | Residue | Details |
| E | HIS8-LYS22 |
| site_id | PS00529 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S24E Ribosomal protein S24e signature. YGggKStGFGlVYNSvadakkfE |
| Chain | Residue | Details |
| Y | TYR64-GLU86 |
| site_id | PS00548 |
| Number of Residues | 37 |
| Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfadGfLihSgqpVndfIEtatrhvlLrqGvlG |
| Chain | Residue | Details |
| D | ALA147-GLY183 |
| site_id | PS00578 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S6E Ribosomal protein S6e signature. IAGGnDkqGfPM |
| Chain | Residue | Details |
| G | ILE52-MET63 |
| site_id | PS00585 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAvvVVGDsn.GhVGlGiktak.EVag.AI |
| Chain | Residue | Details |
| C | GLY98-ILE130 |
| site_id | PS00628 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_S19E Ribosomal protein S19e signature. PhkhvdaSgsInRkVLQsLE |
| Chain | Residue | Details |
| T | PRO90-GLU109 |
| site_id | PS00632 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVYKlglAkSvhhARvLI |
| Chain | Residue | Details |
| J | LEU105-ILE129 |
| site_id | PS00646 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHfwGlrVRGQ |
| Chain | Residue | Details |
| S | ARG123-GLN136 |
| site_id | PS00678 |
| Number of Residues | 15 |
| Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. CVTGsaDySIKLWDV |
| Chain | Residue | Details |
| s | CYS67-VAL81 | |
| g | ALA81-LEU95 | |
| g | ILE123-THR137 | |
| g | ALA218-LEU232 |
| site_id | PS00712 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S17E Ribosomal protein S17e signature. IqSKrLRNkIAGYtTH |
| Chain | Residue | Details |
| R | ILE41-HIS56 |
| site_id | PS00733 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S26E Ribosomal protein S26e signature. YCISCAIH |
| Chain | Residue | Details |
| a | TYR73-HIS80 |
| site_id | PS00948 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S7E Ribosomal protein S7e signature. KLtRELEKKFQdRH |
| Chain | Residue | Details |
| H | LYS76-HIS89 |
| site_id | PS00961 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL |
| Chain | Residue | Details |
| c | GLU58-LEU66 |
| site_id | PS00962 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. AqLLLAARVHLG |
| Chain | Residue | Details |
| A | ALA14-GLY25 |
| site_id | PS00963 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlVIVtDprsDaqaIkEssyvNIP |
| Chain | Residue | Details |
| A | PRO118-PRO142 |
| site_id | PS00996 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA |
| Chain | Residue | Details |
| V | LEU11-ALA19 |
| site_id | PS01168 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgClnittvFShAqtavtCesCStvLctPtG |
| Chain | Residue | Details |
| b | LYS36-GLY68 |
| site_id | PS01189 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S12E Ribosomal protein S12e signature. ALKvvLrtSlvhDGLarGL |
| Chain | Residue | Details |
| M | ALA20-LEU38 |
| site_id | PS01191 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVvEvCLaDL |
| Chain | Residue | Details |
| B | LEU61-LEU73 |
| site_id | PS01193 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_S8E Ribosomal protein S8e signature. RaaTGAkraqf.RkKrKfELG |
| Chain | Residue | Details |
| I | ARG11-GLY30 |
| site_id | PS01262 |
| Number of Residues | 23 |
| Details | IF1A Eukaryotic initiation factor 1A signature. MlGnGRveasCfDGnkRmaHIrG |
| Chain | Residue | Details |
| i | MET41-GLY63 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylserine","evidences":[{"source":"HAMAP-Rule","id":"MF_03015","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 98 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 40 |
| Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 21 |
| Details | Zinc finger: {"description":"C4-type"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 74 |
| Details | Domain: {"description":"S1-like"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 71 |
| Details | Domain: {"description":"S1 motif","evidences":[{"source":"PROSITE-ProRule","id":"PRU00180","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine; by GCN2","evidences":[{"source":"PubMed","id":"10733573","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"1739968","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8336737","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 7 |
| Details | Region: {"description":"G1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 4 |
| Details | Region: {"description":"G2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 3 |
| Details | Region: {"description":"G3","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 3 |
| Details | Region: {"description":"G4","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 2 |
| Details | Region: {"description":"G5","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 10 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"30475211","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 7 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI28 |
| Number of Residues | 85 |
| Details | Domain: {"description":"RRM","evidences":[{"source":"HAMAP-Rule","id":"MF_03001","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI29 |
| Number of Residues | 77 |
| Details | Repeat: {"description":"WD 1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI30 |
| Number of Residues | 87 |
| Details | Repeat: {"description":"WD 2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI31 |
| Number of Residues | 84 |
| Details | Repeat: {"description":"WD 3"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI32 |
| Number of Residues | 79 |
| Details | Repeat: {"description":"WD 4"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI33 |
| Number of Residues | 84 |
| Details | Repeat: {"description":"WD 5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI34 |
| Number of Residues | 45 |
| Details | Repeat: {"description":"WD 6"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI35 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI36 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P40217","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |






