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6FC1

Crystal structure of the eIF4E-Eap1p complex from Saccharomyces cerevisiae in the cap-bound state

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003743molecular_functiontranslation initiation factor activity
A0005737cellular_componentcytoplasm
A0006413biological_processtranslational initiation
C0003723molecular_functionRNA binding
C0003743molecular_functiontranslation initiation factor activity
C0005737cellular_componentcytoplasm
C0006413biological_processtranslational initiation
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue MGP A 301
ChainResidue
ATRP58
AHOH436
AHOH444
AHOH490
AHOH509
AHOH512
ALYS90
AGLU103
ATRP104
AGLU105
AARG157
ALYS162
AHOH424
AHOH425

site_idAC2
Number of Residues7
Detailsbinding site for residue GOL A 302
ChainResidue
ALYS111
AHOH401
AHOH437
CLEU89
CGLY121
CARG157
CASN161

site_idAC3
Number of Residues5
Detailsbinding site for residue GOL B 201
ChainResidue
BARG146
BHOH338
BHOH352
CASN40
DTYR104

site_idAC4
Number of Residues10
Detailsbinding site for residue MGP C 301
ChainResidue
CTRP58
CGLU103
CTRP104
CGLU105
CARG157
CLYS162
CHOH403
CHOH419
CHOH450
CHOH463

site_idAC5
Number of Residues7
Detailsbinding site for residue GOL C 302
ChainResidue
BLYS141
BLYS143
CASP146
CSER147
CGLN148
CHOH401
CHOH506

site_idAC6
Number of Residues9
Detailsbinding site for residue GOL C 303
ChainResidue
BGLU134
CGLU144
CASP145
CARG177
CLYS181
CHOH444
CHOH536
DTYR97
DPRO99

site_idAC7
Number of Residues3
Detailsbinding site for residue GOL C 304
ChainResidue
CGLU170
CSER210
CHOH445

site_idAC8
Number of Residues4
Detailsbinding site for residue GOL D 201
ChainResidue
BASP129
DPRO93
DTYR97
DHOH314

Functional Information from PROSITE/UniProt
site_idPS00813
Number of Residues24
DetailsIF4E Eukaryotic initiation factor 4E signature. DYhvFRndVrPeWEDeanakGGKW
ChainResidueDetails
AASP92-TRP115

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
ASER28
CSER28

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
ChainResidueDetails
ASER30
CSER30

site_idSWS_FT_FI3
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
ChainResidueDetails
ALYS114
CLYS114

223532

PDB entries from 2024-08-07

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