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6D3Y

Highly Potent and Selective Plasmin Inhibitors Based on the Sunflower Trypsin Inhibitor-1 Scaffold Attenuate Fibrinolysis in Plasma

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue SO4 A 801
ChainResidue
AARG610
ASER612
AHIS729
ALEU730
AALA731
AHOH1018

site_idAC2
Number of Residues8
Detailsbinding site for residue GOL C 101
ChainResidue
AHOH924
CARG2
CTHR4
CPHE12
CHOH206
AARG644
AASP646
ATRP761

site_idAC3
Number of Residues7
Detailsbinding site for residue GOL C 102
ChainResidue
CARG2
CPHE12
CASP14
CHOH201
CHOH202
CHOH203
CHOH209

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
ChainResidueDetails
ALEU599-CYS604

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DScqGDSGGPLV
ChainResidueDetails
AASP735-VAL746

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsSITE: Reactive bond => ECO:0000250|UniProtKB:P81705
ChainResidueDetails
CLYS5
AASP646
ASER741

site_idSWS_FT_FI2
Number of Residues2
DetailsCROSSLNK: Cyclopeptide (Gly-Asp)
ChainResidueDetails
CGLY1
CASP14

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:9201958
ChainResidueDetails
ASER578

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:24275569
ChainResidueDetails
ASER669

Catalytic Information from CSA
site_idMCSA1
Number of Residues4
DetailsM-CSA 425
ChainResidueDetails
AHIS603proton shuttle (general acid/base)
AASP646electrostatic stabiliser, modifies pKa
ASER741covalent catalysis, proton shuttle (general acid/base)
AGLY742electrostatic stabiliser

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PDB entries from 2024-07-31

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