6D3Y
Highly Potent and Selective Plasmin Inhibitors Based on the Sunflower Trypsin Inhibitor-1 Scaffold Attenuate Fibrinolysis in Plasma
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 85.905, 41.506, 79.527 |
Unit cell angles | 90.00, 109.63, 90.00 |
Refinement procedure
Resolution | 40.455 - 1.320 |
R-factor | 0.1921 |
Rwork | 0.191 |
R-free | 0.21320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 5UGG & 1SFI |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 74.903 | 40.455 | 1.390 |
High resolution limit [Å] | 1.320 | 4.170 | 1.320 |
Rmerge | 0.060 | 1.064 | |
Rmeas | 0.115 | 0.068 | 1.241 |
Rpim | 0.056 | 0.032 | 0.630 |
Number of reflections | 60637 | 2068 | 8280 |
<I/σ(I)> | 9.2 | 7.6 | 0.6 |
Completeness [%] | 97.5 | 99.9 | 92.3 |
Redundancy | 4.1 | 4.1 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 0.1 M 2-ethanesulfonic acid, 0.15 M ammonium sulfate, 13% PEG4000 |