5W0U
Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with dCMP
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0005515 | molecular_function | protein binding |
A | 0006974 | biological_process | DNA damage response |
A | 0008643 | biological_process | carbohydrate transport |
A | 0015144 | molecular_function | carbohydrate transmembrane transporter activity |
A | 0015768 | biological_process | maltose transport |
A | 0016020 | cellular_component | membrane |
A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
A | 0034219 | biological_process | carbohydrate transmembrane transport |
A | 0034289 | biological_process | detection of maltose stimulus |
A | 0042597 | cellular_component | periplasmic space |
A | 0042956 | biological_process | maltodextrin transmembrane transport |
A | 0043190 | cellular_component | ATP-binding cassette (ABC) transporter complex |
A | 0055052 | cellular_component | ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing |
A | 0055085 | biological_process | transmembrane transport |
A | 0060326 | biological_process | cell chemotaxis |
A | 1901982 | molecular_function | maltose binding |
A | 1990060 | cellular_component | maltose transport complex |
B | 0003824 | molecular_function | catalytic activity |
B | 0005515 | molecular_function | protein binding |
B | 0006974 | biological_process | DNA damage response |
B | 0008643 | biological_process | carbohydrate transport |
B | 0015144 | molecular_function | carbohydrate transmembrane transporter activity |
B | 0015768 | biological_process | maltose transport |
B | 0016020 | cellular_component | membrane |
B | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
B | 0034219 | biological_process | carbohydrate transmembrane transport |
B | 0034289 | biological_process | detection of maltose stimulus |
B | 0042597 | cellular_component | periplasmic space |
B | 0042956 | biological_process | maltodextrin transmembrane transport |
B | 0043190 | cellular_component | ATP-binding cassette (ABC) transporter complex |
B | 0055052 | cellular_component | ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing |
B | 0055085 | biological_process | transmembrane transport |
B | 0060326 | biological_process | cell chemotaxis |
B | 1901982 | molecular_function | maltose binding |
B | 1990060 | cellular_component | maltose transport complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue ZN B 2001 |
Chain | Residue |
B | HIS1056 |
B | CYS1087 |
B | CYS1090 |
B | HOH4001 |
site_id | AC2 |
Number of Residues | 8 |
Details | binding site for residue DCM B 2002 |
Chain | Residue |
B | CYS1087 |
B | TYR1114 |
B | HOH4001 |
B | ARG1025 |
B | THR1027 |
B | ASN1051 |
B | SER1085 |
B | PRO1086 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue CA B 2003 |
Chain | Residue |
B | THR367 |
B | ASN368 |
B | ALA370 |
B | ASP1045 |
B | PHE1046 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue GOL B 2004 |
Chain | Residue |
B | ARG1107 |
B | PHE1109 |
B | LYS1142 |
B | ASP1143 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue ZN A 2001 |
Chain | Residue |
A | HIS1056 |
A | CYS1087 |
A | CYS1090 |
A | HOH4001 |
site_id | AC6 |
Number of Residues | 8 |
Details | binding site for residue DCM A 2002 |
Chain | Residue |
A | ARG1025 |
A | THR1027 |
A | ASN1051 |
A | SER1085 |
A | PRO1086 |
A | CYS1087 |
A | TYR1114 |
A | HOH4001 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue CA A 2003 |
Chain | Residue |
A | THR367 |
A | ASN368 |
A | ALA370 |
A | ASP1045 |
A | PHE1046 |
Functional Information from PROSITE/UniProt
site_id | PS01037 |
Number of Residues | 18 |
Details | SBP_BACTERIAL_1 Bacterial extracellular solute-binding proteins, family 1 signature. PIAvEalSLIYNkdlLpN |
Chain | Residue | Details |
B | PRO108-ASN125 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor => ECO:0000250|UniProtKB:P0ABF6 |
Chain | Residue | Details |
B | ALA1058 | |
A | ALA1058 |
site_id | SWS_FT_FI2 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000269|PubMed:27258794 |
Chain | Residue | Details |
B | HIS1056 | |
B | CYS1087 | |
B | CYS1090 | |
A | HIS1056 | |
A | CYS1087 | |
A | CYS1090 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | MOD_RES: Phosphothreonine; by PKA => ECO:0000269|PubMed:16387847 |
Chain | Residue | Details |
B | THR1027 | |
A | THR1027 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | MOD_RES: Phosphoserine; by PKA => ECO:0000269|PubMed:16387847, ECO:0000269|PubMed:18722174 |
Chain | Residue | Details |
B | SER1038 | |
A | SER1038 |