Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5W0U

Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with dCMP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2016-04-20
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9791
Spacegroup nameP 1 2 1
Unit cell lengths125.005, 39.777, 153.935
Unit cell angles90.00, 90.14, 90.00
Refinement procedure
Resolution153.935 - 2.900
R-factor0.2521
Rwork0.251
R-free0.28140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5w0r
RMSD bond length0.006
RMSD bond angle0.739
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]153.9353.070
High resolution limit [Å]2.9002.940
Rmerge0.0940.656
Rpim0.313
Number of reflections366533868
<I/σ(I)>12.12.8
Completeness [%]98.399.7
Redundancy9.810.2
CC(1/2)0.974
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.22890.1 M MES at pH 6.2, 3%PEG3350, 10 mM CaCl2, 20mM dCMP

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon