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5V87

Crystal structure of LARP1-unique domain DM15 bound to m7GpppC

Functional Information from GO Data
ChainGOidnamespacecontents
A0000339molecular_functionRNA cap binding
A0048255biological_processmRNA stabilization
B0000339molecular_functionRNA cap binding
B0048255biological_processmRNA stabilization
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue MGT A 1001
ChainResidue
ASER882
AHOH1126
B91P1001
ATYR883
AGLU886
AGLU914
ALYS915
AALA918
ATYR922
AHOH1103
AHOH1105

site_idAC2
Number of Residues18
Detailsbinding site for residue 91P B 1001
ChainResidue
AARG879
ATYR883
ATYR911
AGLU914
ALYS915
AMGT1001
BARG847
BARG879
BSER882
BTYR883
BGLU886
BGLU914
BLYS915
BALA918
BTYR922
BHOH1106
BHOH1128
BHOH1144

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues86
DetailsRegion: {"description":"Interaction with 7-methylguanosine mRNA cap structure","evidences":[{"source":"PubMed","id":"28379136","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5V87","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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