5V39

Crystal structure of human vitamin D receptor ligand binding domain in complex with a VDRM

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003677	molecular_function	DNA binding
A	0004879	molecular_function	nuclear receptor activity
A	0006355	biological_process	regulation of DNA-templated transcription

Functional Information from PDB Data

site_id	AC1
Number of Residues	15
Details	binding site for residue 8VM A 501

Chain	Residue
A	TYR143
A	CYS288
A	TYR295
A	HIS305
A	HIS397
A	HOH621
A	HOH625
A	ALA231
A	LEU233
A	VAL234
A	SER237
A	ARG274
A	SER275
A	SER278
A	TRP286

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	BINDING: BINDING => ECO:0000269|PubMed:10678179, ECO:0000269|PubMed:11344298, ECO:0007744|PDB:1DB1

Chain	Residue	Details
A	ILE238

---

site_id	SWS_FT_FI2
Number of Residues	1
Details	BINDING: BINDING => ECO:0000269|PubMed:10678179, ECO:0000269|PubMed:11344298, ECO:0007744|PDB:1DB1, ECO:0007744|PDB:1IE8

Chain	Residue	Details
A	SER275

---

site_id	SWS_FT_FI3
Number of Residues	2
Details	BINDING: BINDING => ECO:0000269|PubMed:10678179, ECO:0000269|PubMed:11344298, ECO:0007744|PDB:1IE8

Chain	Residue	Details
A	PHE279
A	SER306

---

site_id	SWS_FT_FI4
Number of Residues	1
Details	BINDING: BINDING => ECO:0000269|PubMed:10678179, ECO:0000269|PubMed:11344298

Chain	Residue	Details
A	SER398

---