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5NG9

Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with agonist CIP-AS at 1.15 A resolution.

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue FLC A 301
ChainResidue
AMET19
AHIS23
AARG31
AFLC302
AHOH436
AHOH601
AHOH659

site_idAC2
Number of Residues5
Detailsbinding site for residue FLC A 302
ChainResidue
AHOH401
AHOH411
AHOH482
AARG31
AFLC301

site_idAC3
Number of Residues4
Detailsbinding site for residue LI A 303
ChainResidue
AGLU97
AILE100
AASP101
AHOH459

site_idAC4
Number of Residues16
Detailsbinding site for residue 8VN A 304
ChainResidue
ATYR61
APRO89
ATHR91
AARG96
ALEU138
AGLY141
ASER142
ATHR143
AGLU193
AMET196
A8WQ305
AHOH414
AHOH462
AHOH579
AHOH597
AHOH609

site_idAC5
Number of Residues14
Detailsbinding site for residue 8WQ A 305
ChainResidue
ATYR61
APRO89
ATHR91
AARG96
ALEU138
AGLY141
ASER142
ATHR143
AGLU193
A8VN304
AHOH462
AHOH579
AHOH597
AHOH609

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 A 306
ChainResidue
ALYS82
ALYS116
AHOH403
AHOH610
AHOH635

site_idAC7
Number of Residues3
Detailsbinding site for residue SO4 A 307
ChainResidue
AARG64
ALYS69
AHOH580

site_idAC8
Number of Residues4
Detailsbinding site for residue SO4 A 308
ChainResidue
AARG148
AARG149
AHOH453
AHOH720

site_idAC9
Number of Residues8
Detailsbinding site for residue GOL A 309
ChainResidue
ALYS60
ASER140
AHOH406
AHOH444
AHOH455
AHOH477
AHOH614
AHOH650

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11086992","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16483599","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1FTJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2CMO","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues3
DetailsSite: {"description":"Interaction with the cone snail toxin Con-ikot-ikot","evidences":[{"source":"PubMed","id":"25103405","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsSite: {"description":"Crucial to convey clamshell closure to channel opening","evidences":[{"source":"PubMed","id":"25103405","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine; by PKC","evidences":[{"source":"PubMed","id":"8848293","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine; by PKG","evidences":[{"source":"PubMed","id":"8848293","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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