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5MG3

EM fitted model of bacterial holo-translocon

Functional Information from GO Data
ChainGOidnamespacecontents
C0005515molecular_functionprotein binding
C0005886cellular_componentplasma membrane
C0006457biological_processprotein folding
C0015031biological_processprotein transport
C0016020cellular_componentmembrane
C0031522cellular_componentcell envelope Sec protein transport complex
C0032977molecular_functionmembrane insertase activity
C0032978biological_processprotein insertion into membrane from inner side
C0043952biological_processprotein transport by the Sec complex
C0051205biological_processprotein insertion into membrane
C0065003biological_processprotein-containing complex assembly
D0005515molecular_functionprotein binding
D0005886cellular_componentplasma membrane
D0006605biological_processprotein targeting
D0006886biological_processintracellular protein transport
D0015031biological_processprotein transport
D0015450molecular_functionprotein-transporting ATPase activity
D0016020cellular_componentmembrane
D0031522cellular_componentcell envelope Sec protein transport complex
D0032978biological_processprotein insertion into membrane from inner side
D0043952biological_processprotein transport by the Sec complex
D0065002biological_processintracellular protein transmembrane transport
E0005515molecular_functionprotein binding
E0005886cellular_componentplasma membrane
E0006605biological_processprotein targeting
E0006616biological_processSRP-dependent cotranslational protein targeting to membrane, translocation
E0006886biological_processintracellular protein transport
E0008320molecular_functionprotein transmembrane transporter activity
E0009306biological_processprotein secretion
E0015031biological_processprotein transport
E0016020cellular_componentmembrane
E0031522cellular_componentcell envelope Sec protein transport complex
E0032978biological_processprotein insertion into membrane from inner side
E0043952biological_processprotein transport by the Sec complex
E0065002biological_processintracellular protein transmembrane transport
F0005886cellular_componentplasma membrane
F0006605biological_processprotein targeting
F0006886biological_processintracellular protein transport
F0015031biological_processprotein transport
F0015450molecular_functionprotein-transporting ATPase activity
F0016020cellular_componentmembrane
F0031522cellular_componentcell envelope Sec protein transport complex
F0032978biological_processprotein insertion into membrane from inner side
F0043952biological_processprotein transport by the Sec complex
F0065002biological_processintracellular protein transmembrane transport
G0005515molecular_functionprotein binding
G0005886cellular_componentplasma membrane
G0006616biological_processSRP-dependent cotranslational protein targeting to membrane, translocation
G0006886biological_processintracellular protein transport
G0008320molecular_functionprotein transmembrane transporter activity
G0009306biological_processprotein secretion
G0015031biological_processprotein transport
G0015450molecular_functionprotein-transporting ATPase activity
G0016020cellular_componentmembrane
G0031522cellular_componentcell envelope Sec protein transport complex
G0032978biological_processprotein insertion into membrane from inner side
G0043952biological_processprotein transport by the Sec complex
G0065002biological_processintracellular protein transmembrane transport
Y0005048molecular_functionsignal sequence binding
Y0005515molecular_functionprotein binding
Y0005886cellular_componentplasma membrane
Y0006605biological_processprotein targeting
Y0006616biological_processSRP-dependent cotranslational protein targeting to membrane, translocation
Y0006886biological_processintracellular protein transport
Y0008320molecular_functionprotein transmembrane transporter activity
Y0015031biological_processprotein transport
Y0016020cellular_componentmembrane
Y0031522cellular_componentcell envelope Sec protein transport complex
Y0032978biological_processprotein insertion into membrane from inner side
Y0043952biological_processprotein transport by the Sec complex
Y0065002biological_processintracellular protein transmembrane transport
Functional Information from PROSITE/UniProt
site_idPS00755
Number of Residues20
DetailsSECY_1 Protein secY signature 1. SIFaLGImPYIsASIIIQLL
ChainResidueDetails
YSER76-LEU95

site_idPS00756
Number of Residues18
DetailsSECY_2 Protein secY signature 2. WLgEqITer.GIGNGiSII
ChainResidueDetails
YTRP173-ILE190

site_idPS01067
Number of Residues29
DetailsSECE_SEC61G Protein secE/sec61-gamma signature. FaREaRteVrKviWPtrqEtlhttLIVAA
ChainResidueDetails
EPHE452-ALA480

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues127
DetailsTRANSMEM: Helical => ECO:0000305
ChainResidueDetails
CASN6-TRP23
CLEU343-TYR370
CVAL417-LEU446
CTYR464-MET481
CILE494-PHE509
CLEU513-LEU535

site_idSWS_FT_FI2
Number of Residues336
DetailsTOPO_DOM: Periplasmic
ChainResidueDetails
CGLU24-LYS342
CARG447-PRO463
CPRO510-GLY512
FLEU197-VAL217
FTHR248-LEU270
FVAL281-MET301

site_idSWS_FT_FI3
Number of Residues68
DetailsTOPO_DOM: Cytoplasmic
ChainResidueDetails
CPRO371-LYS416
CSER482-LYS493
CGLU536-SER548

site_idSWS_FT_FI4
Number of Residues35
DetailsTRANSMEM: Discontinuously helical; Name=2 => ECO:0000250
ChainResidueDetails
YILE61-THR96

site_idSWS_FT_FI5
Number of Residues9
DetailsINTRAMEM: Helical; Name=Helix 2A => ECO:0000305
ChainResidueDetails
YILE61-GLY70

site_idSWS_FT_FI6
Number of Residues5
DetailsINTRAMEM: INTRAMEM => ECO:0000305
ChainResidueDetails
YALA71-SER76

site_idSWS_FT_FI7
Number of Residues19
DetailsINTRAMEM: Helical; Name=Helix 2B => ECO:0000305
ChainResidueDetails
YILE77-THR96

site_idSWS_FT_FI8
Number of Residues15
DetailsTRANSMEM: Helical; Name=3 => ECO:0000305
ChainResidueDetails
YILE116-GLN131

site_idSWS_FT_FI9
Number of Residues80
DetailsTOPO_DOM: Periplasmic => ECO:0000305
ChainResidueDetails
YSER132-LEU164
YPRO201-VAL223
YALA288-GLY313
YLYS396

site_idSWS_FT_FI10
Number of Residues13
DetailsTRANSMEM: Helical; Name=4 => ECO:0000305
ChainResidueDetails
YVAL165-ILE178

site_idSWS_FT_FI11
Number of Residues16
DetailsTRANSMEM: Helical; Name=5 => ECO:0000305
ChainResidueDetails
YGLY184-PRO200

site_idSWS_FT_FI12
Number of Residues13
DetailsTRANSMEM: Helical; Name=6 => ECO:0000305
ChainResidueDetails
YALA224-VAL237

site_idSWS_FT_FI13
Number of Residues13
DetailsTRANSMEM: Helical; Name=7 => ECO:0000305
ChainResidueDetails
YVAL274-PRO287

site_idSWS_FT_FI14
Number of Residues15
DetailsTRANSMEM: Helical; Name=8 => ECO:0000305
ChainResidueDetails
YGLN314-CYS329

site_idSWS_FT_FI15
Number of Residues14
DetailsTRANSMEM: Helical; Name=9 => ECO:0000305
ChainResidueDetails
YILE381-MET395

site_idSWS_FT_FI16
Number of Residues16
DetailsTRANSMEM: Helical; Name=10 => ECO:0000305
ChainResidueDetails
YVAL397-ILE413

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PDB entries from 2024-07-24

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