5MAR
Structure of human SIRT2 in complex with 1,2,4-Oxadiazole inhibitor and ADP ribose.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0017136 | molecular_function | histone deacetylase activity, NAD-dependent |
| A | 0051287 | molecular_function | NAD binding |
| A | 0070403 | molecular_function | NAD+ binding |
| B | 0017136 | molecular_function | histone deacetylase activity, NAD-dependent |
| B | 0051287 | molecular_function | NAD binding |
| B | 0070403 | molecular_function | NAD+ binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 401 |
| Chain | Residue |
| A | CYS195 |
| A | CYS200 |
| A | CYS221 |
| A | CYS224 |
| site_id | AC2 |
| Number of Residues | 27 |
| Details | binding site for residue AR6 A 402 |
| Chain | Residue |
| A | PHE96 |
| A | ARG97 |
| A | TYR104 |
| A | GLN167 |
| A | HIS187 |
| A | PHE235 |
| A | GLY261 |
| A | THR262 |
| A | SER263 |
| A | VAL266 |
| A | ASN286 |
| A | LYS287 |
| A | GLU288 |
| A | GLY322 |
| A | GLU323 |
| A | CYS324 |
| A | 7KE403 |
| A | EDO405 |
| A | HOH535 |
| A | HOH545 |
| A | HOH554 |
| A | HOH606 |
| A | GLY84 |
| A | ALA85 |
| A | GLY86 |
| A | THR89 |
| A | ASP95 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | binding site for residue 7KE A 403 |
| Chain | Residue |
| A | PHE96 |
| A | PHE119 |
| A | LEU134 |
| A | LEU138 |
| A | ILE169 |
| A | ILE232 |
| A | VAL233 |
| A | AR6402 |
| B | LEU297 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | binding site for residue EDO A 404 |
| Chain | Residue |
| A | SER311 |
| A | ALA314 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 405 |
| Chain | Residue |
| A | THR89 |
| A | SER90 |
| A | LYS287 |
| A | GLU323 |
| A | AR6402 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue DMS A 406 |
| Chain | Residue |
| A | TRP320 |
| A | LEU321 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue DMS A 407 |
| Chain | Residue |
| A | PHE96 |
| A | ASN168 |
| A | ILE169 |
| A | ASP170 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | binding site for residue DMS A 408 |
| Chain | Residue |
| A | ARG77 |
| A | ARG78 |
| A | GLY159 |
| A | LEU161 |
| A | LEU162 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | binding site for residue DMS A 409 |
| Chain | Residue |
| A | LEU162 |
| A | ARG163 |
| A | GLU181 |
| A | ASP182 |
| site_id | AD1 |
| Number of Residues | 3 |
| Details | binding site for residue DMS A 410 |
| Chain | Residue |
| A | ARG75 |
| A | TYR104 |
| A | ASP105 |
| site_id | AD2 |
| Number of Residues | 9 |
| Details | binding site for residue GOL A 411 |
| Chain | Residue |
| A | GLY291 |
| A | SER293 |
| A | MET299 |
| A | MET301 |
| A | GLY302 |
| A | GLY304 |
| A | GLY305 |
| A | GLY306 |
| A | HOH559 |
| site_id | AD3 |
| Number of Residues | 5 |
| Details | binding site for residue GOL A 412 |
| Chain | Residue |
| A | ARG153 |
| A | GLU348 |
| A | SER351 |
| A | HOH507 |
| B | CYS224 |
| site_id | AD4 |
| Number of Residues | 4 |
| Details | binding site for residue ZN B 401 |
| Chain | Residue |
| B | CYS195 |
| B | CYS200 |
| B | CYS221 |
| B | CYS224 |
| site_id | AD5 |
| Number of Residues | 25 |
| Details | binding site for residue AR6 B 402 |
| Chain | Residue |
| B | LYS287 |
| B | GLU288 |
| B | GLY322 |
| B | GLU323 |
| B | CYS324 |
| B | 7KE403 |
| B | HOH533 |
| B | HOH547 |
| B | HOH548 |
| B | GLY84 |
| B | ALA85 |
| B | GLY86 |
| B | THR89 |
| B | ASP95 |
| B | PHE96 |
| B | ARG97 |
| B | TYR104 |
| B | GLN167 |
| B | HIS187 |
| B | PHE235 |
| B | GLY261 |
| B | THR262 |
| B | SER263 |
| B | VAL266 |
| B | ASN286 |
| site_id | AD6 |
| Number of Residues | 8 |
| Details | binding site for residue 7KE B 403 |
| Chain | Residue |
| B | PHE96 |
| B | PHE119 |
| B | LEU134 |
| B | LEU138 |
| B | ILE169 |
| B | ILE232 |
| B | VAL233 |
| B | AR6402 |
| site_id | AD7 |
| Number of Residues | 3 |
| Details | binding site for residue ACT B 404 |
| Chain | Residue |
| B | ALA319 |
| B | TRP320 |
| B | LEU321 |
| site_id | AD8 |
| Number of Residues | 4 |
| Details | binding site for residue DMS B 405 |
| Chain | Residue |
| B | PHE96 |
| B | ASN168 |
| B | ILE169 |
| B | ASP170 |
| site_id | AD9 |
| Number of Residues | 3 |
| Details | binding site for residue DMS B 406 |
| Chain | Residue |
| B | ARG77 |
| B | GLY159 |
| B | LEU161 |
| site_id | AE1 |
| Number of Residues | 4 |
| Details | binding site for residue DMS B 407 |
| Chain | Residue |
| B | LEU162 |
| B | ARG163 |
| B | GLU181 |
| B | ASP182 |
| site_id | AE2 |
| Number of Residues | 4 |
| Details | binding site for residue DMS B 408 |
| Chain | Residue |
| A | HOH556 |
| A | HOH701 |
| B | TYR114 |
| B | GOL409 |
| site_id | AE3 |
| Number of Residues | 2 |
| Details | binding site for residue GOL B 409 |
| Chain | Residue |
| B | GLU116 |
| B | DMS408 |
| site_id | AE4 |
| Number of Residues | 9 |
| Details | binding site for residue GOL B 410 |
| Chain | Residue |
| A | SER73 |
| A | GLU74 |
| A | CYS76 |
| A | ARG77 |
| B | SER122 |
| B | TYR123 |
| B | LYS126 |
| B | HOH558 |
| B | HOH598 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 562 |
| Details | Domain: {"description":"Deacetylase sirtuin-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00236","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU00236","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 26 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"25672491","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4RMG","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00236","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11427894","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23454361","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24389023","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25672491","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25704306","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4R8M","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q5RJQ4","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
