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5JSJ

Crystal structure of Spindlin1 bound to compound EML631

Functional Information from GO Data
ChainGOidnamespacecontents
A0007276biological_processgamete generation
B0007276biological_processgamete generation
Functional Information from PDB Data
site_idAC1
Number of Residues17
Detailsbinding site for residue 6PD A 301
ChainResidue
AHIS60
ATRP151
AASP173
ATYR177
ATYR179
AHIS252
AHOH417
AHOH419
AHOH431
ATRP62
ATRP72
ATYR91
APHE94
ACYS96
ATYR98
ALEU100
APHE141

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 302
ChainResidue
AHOH405
AHOH407
AHOH423
BHOH420
BHOH423
BHOH429

site_idAC3
Number of Residues2
Detailsbinding site for residue CL A 303
ChainResidue
AARG152
ALYS172

site_idAC4
Number of Residues16
Detailsbinding site for residue 6PD B 301
ChainResidue
BTRP62
BTRP72
BTYR91
BPHE94
BCYS96
BTYR98
BLEU100
BPHE141
BTRP151
BTYR170
BASP173
BTYR177
BTYR179
BHIS252
BHOH416
BHOH434

site_idAC5
Number of Residues3
Detailsbinding site for residue CL B 302
ChainResidue
AHOH405
BARG152
BLYS172

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues126
DetailsRegion: {"description":"Tudor-like domain 1","evidences":[{"source":"PubMed","id":"23077255","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24589551","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues16
DetailsRegion: {"description":"Histone H3K4me3 and H3R8me2a binding","evidences":[{"source":"PubMed","id":"23077255","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24589551","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues122
DetailsRegion: {"description":"Tudor-like domain 2","evidences":[{"source":"PubMed","id":"23077255","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24589551","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsSite: {"description":"Histone H3K4me3 and H3R8me2a binding","evidences":[{"source":"PubMed","id":"23077255","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24589551","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by AURKA","evidences":[{"source":"PubMed","id":"22258766","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by AURKA","evidences":[{"source":"PubMed","id":"22258766","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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