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5GUT

The crystal structure of mouse DNMT1 (731-1602) mutant - N1248A

Functional Information from GO Data
ChainGOidnamespacecontents
A0003682molecular_functionchromatin binding
A0008168molecular_functionmethyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues24
Detailsbinding site for residue SAH A 1701
ChainResidue
APHE1148
ATRP1173
AGLU1192
AASP1193
ACYS1194
AGLY1226
ALEU1250
AASN1580
AALA1581
AVAL1582
AHOH1906
ASER1149
AHOH1941
AHOH1977
AHOH1982
AHOH2001
AHOH2071
AGLY1150
ACYS1151
AGLY1152
AGLY1153
ALEU1154
AGLU1171
AMET1172

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 1702
ChainResidue
AHIS796
ACYS823
ACYS897
ACYS900

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 1703
ChainResidue
ACYS1479
ACYS1481
ACYS1487
AHIS1504

site_idAC4
Number of Residues8
Detailsbinding site for residue SO4 A 1704
ChainResidue
AGLN1303
ATHR1312
AARG1313
AARG1314
ATHR1527
AHOH1845
AHOH2041
AHOH2122

site_idAC5
Number of Residues4
Detailsbinding site for residue SO4 A 1705
ChainResidue
AGLN1409
AARG1413
ASER1564
AHOH1858

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 A 1706
ChainResidue
AGLN1446
AHIS1456
ALYS1457
AHOH1808
AHOH1856

site_idAC7
Number of Residues5
Detailsbinding site for residue SO4 A 1707
ChainResidue
AASN953
AASP1049
AGLU1050
AGLU1051
AHOH2097

site_idAC8
Number of Residues4
Detailsbinding site for residue SO4 A 1708
ChainResidue
AARG1181
ATHR1187
AVAL1189
AGLN1212

site_idAC9
Number of Residues5
Detailsbinding site for residue SO4 A 1709
ChainResidue
AASN1239
AARG1241
ATHR1242
ALYS1245
AARG1278

site_idAD1
Number of Residues2
Detailsbinding site for residue SO4 A 1710
ChainResidue
AHIS1031
AARG1032

site_idAD2
Number of Residues5
Detailsbinding site for residue SO4 A 1711
ChainResidue
APHE1494
ASER1495
AHOH1947
AHOH2048
AHOH2059

site_idAD3
Number of Residues3
Detailsbinding site for residue SO4 A 1712
ChainResidue
AALA949
APHE950
ATHR951

site_idAD4
Number of Residues5
Detailsbinding site for residue SO4 A 1713
ChainResidue
AGLN875
AGLU876
AARG902
ALYS1095
AHOH1880

Functional Information from PROSITE/UniProt
site_idPS00094
Number of Residues13
DetailsC5_MTASE_1 C-5 cytosine-specific DNA methylases active site. EmLcgGpPCqGFS
ChainResidueDetails
AGLU1221-SER1233

site_idPS00095
Number of Residues19
DetailsC5_MTASE_2 C-5 cytosine-specific DNA methylases C-terminal signature. RqvGNAVpPpLakaIgleI
ChainResidueDetails
AARG1576-ILE1594

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"evidences":[{"source":"PubMed","id":"17576694","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21163962","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3PT6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4DA4","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21163962","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3PT6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3PT9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4DA4","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21163962","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3PT6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3PT9","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues5
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P26358","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P26358","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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