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5E3H

Structural Basis for RNA Recognition and Activation of RIG-I

Replaces:  3TMI
Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0005524molecular_functionATP binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 1001
ChainResidue
ACYS810
ACYS813
ACYS864
ACYS869

site_idAC2
Number of Residues3
Detailsbinding site for residue MG A 1002
ChainResidue
AARG320
AASN341
AASN341

site_idAC3
Number of Residues3
Detailsbinding site for residue MG A 1003
ChainResidue
ABEF1007
AASP372
AADP1006

site_idAC4
Number of Residues2
Detailsbinding site for residue MG A 1004
ChainResidue
AASN298
AHIS381

site_idAC5
Number of Residues4
Detailsbinding site for residue GOL A 1005
ChainResidue
AGLY257
AASN259
ALEU402
AGLN404

site_idAC6
Number of Residues13
Detailsbinding site for residue ADP A 1006
ChainResidue
APHE241
ALYS242
AARG244
AGLN247
APRO265
ATHR266
AGLY267
AGLY269
ALYS270
ATHR271
AASP705
AMG1003
ABEF1007

site_idAC7
Number of Residues6
Detailsbinding site for residue BEF A 1007
ChainResidue
ATHR266
ALYS270
AGLU373
AGLU702
AMG1003
AADP1006

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305
ChainResidueDetails
AALA264

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU01125
ChainResidueDetails
ACYS810
ACYS813
ACYS864
ACYS869

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: (Microbial infection) Deamidated asparagine; by herpes simplex virus 1/HHV-1 UL37 => ECO:0000269|PubMed:27866900
ChainResidueDetails
AASN495
AASN549

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphothreonine; by CK2 => ECO:0000269|PubMed:21068236
ChainResidueDetails
ATHR770

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphoserine; by CK2 => ECO:0000269|PubMed:21068236
ChainResidueDetails
ASER854
ASER855

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
ALYS858

site_idSWS_FT_FI7
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:Q6Q899
ChainResidueDetails
ALYS812

219140

PDB entries from 2024-05-01

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