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4NCN

Crystal structure of eukaryotic translation initiation factor eIF5B (517-858) from Chaetomium thermophilum in complex with GTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues26
DetailsBINDING SITE FOR RESIDUE GTP A 1001
ChainResidue
AVAL532
AILE556
ATHR557
AGLY597
AASN648
ALYS649
AASP651
AARG652
ASER716
AALA717
AHIS718
AASP533
AMG1002
ANA1003
AHOH1101
AHOH1102
AHOH1103
AHOH1146
AHOH1156
ATHR534
AGLY535
ALYS536
ATHR537
ALYS538
AGLN549
AGLY555

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1002
ChainResidue
ATHR537
ATHR557
AGTP1001
AHOH1101
AHOH1102

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 1003
ChainResidue
AASP533
AGLY555
AILE556
AGTP1001

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 1004
ChainResidue
ALYS542
AILE543
AGLN545
ALYS573
AILE723
APRO724
AHOH1110
AHOH1126

site_idAC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 1005
ChainResidue
AHIS531
AVAL532
AASP533
ATHR534
AASP620
AHIS623
AGLU626
ALYS649
AHOH1296
AHOH1323

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 1006
ChainResidue
AASP541
ALYS542
AGLN545
ATHR546
AASN547
AHOH1116
AHOH1203

site_idAC7
Number of Residues28
DetailsBINDING SITE FOR RESIDUE GTP B 1001
ChainResidue
BVAL532
BASP533
BTHR534
BGLY535
BLYS536
BTHR537
BLYS538
BGLN549
BGLY555
BILE556
BTHR557
BGLY597
BASN648
BLYS649
BASP651
BARG652
BSER716
BALA717
BHIS718
BMG1002
BNA1003
BHOH1101
BHOH1102
BHOH1103
BHOH1123
BHOH1137
BHOH1262
BHOH1343

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 1002
ChainResidue
BTHR537
BTHR557
BGTP1001
BHOH1101
BHOH1102

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 1003
ChainResidue
BASP533
BGLY555
BILE556
BGTP1001

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACY B 1004
ChainResidue
BARG775
BHOH1197
BHOH1203
BHOH1347
BGLY772
BILE773

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 1005
ChainResidue
BLEU521
BLYS571
BPHE585
BLYS586
BVAL587
BPRO588

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 1006
ChainResidue
BLYS538
BASP541
BLYS542
BTHR546
BASN547
BALA717
BHOH1159

site_idBC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 1007
ChainResidue
BLYS542
BILE543
BGLN545
BLYS573
BILE723
BHOH1106
BHOH1169
BHOH1297

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 1008
ChainResidue
BTHR546
BASN547
BVAL548
BGLU804
BHOH1253

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:25225612, ECO:0007744|PDB:4TMV, ECO:0007744|PDB:4TMW, ECO:0007744|PDB:4TMX
ChainResidueDetails
AASP533
AGLY555
BASP533
BGLY555

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:25225612
ChainResidueDetails
ATHR537
AGLN549
ATHR557
BTHR537
BGLN549
BTHR557

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:24686316, ECO:0000269|PubMed:25225612
ChainResidueDetails
AASN648
AALA717
BASN648
BALA717

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PDB entries from 2024-07-10

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