Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4D8D

Crystal structure of HIV-1 NEF Fyn-SH3 R96W variant

Functional Information from GO Data
ChainGOidnamespacecontents
B0005525molecular_functionGTP binding
D0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL C 201
ChainResidue
BPHE191
CGLU121
CHOH303
DTYR81
DLYS82
DASP86

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues9
DetailsRegion: {"description":"SH3-binding; interaction with Src family tyrosine kinases","evidences":[{"source":"HAMAP-Rule","id":"MF_04078","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"7859737","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8681387","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues32
DetailsRegion: {"description":"Mediates dimerization, Nef-PTE1 interaction, Nef-induced CD4 and MHC-I down-regulation and enhancement of infectivity","evidences":[{"source":"PubMed","id":"19781555","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsMotif: {"description":"PxxP; stabilizes the interaction of NEF/MHC-I with host AP1M1; necessary for MHC-I internalization","evidences":[{"source":"HAMAP-Rule","id":"MF_04078","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

242500

PDB entries from 2025-10-01

PDB statisticsPDBj update infoContact PDBjnumon