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3X42

Crystal structure of copper amine oxidase from Arthrobacter globiformis in the presence of sodium bromide

Functional Information from GO Data
ChainGOidnamespacecontents
A0005507molecular_functioncopper ion binding
A0008131molecular_functionprimary amine oxidase activity
A0009308biological_processamine metabolic process
A0016491molecular_functionoxidoreductase activity
A0046872molecular_functionmetal ion binding
A0048038molecular_functionquinone binding
A0052595molecular_functionaliphatic amine oxidase activity
B0005507molecular_functioncopper ion binding
B0008131molecular_functionprimary amine oxidase activity
B0009308biological_processamine metabolic process
B0016491molecular_functionoxidoreductase activity
B0046872molecular_functionmetal ion binding
B0048038molecular_functionquinone binding
B0052595molecular_functionaliphatic amine oxidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CU A 701
ChainResidue
AHIS431
AHIS433
AHIS592
AHOH932
AHOH1041

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE BR A 702
ChainResidue
ASER529
AARG532
ASER562

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE BR A 703
ChainResidue
ASER374
AHIS345

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE BR A 704
ChainResidue
AASP128
AHOH1271

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE BR A 705
ChainResidue
AGLY34
APRO35
AGLU36

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 706
ChainResidue
AASP440
AMET441
AASP581
AILE582
AHOH831

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE K A 707
ChainResidue
AVAL79
ATHR80
AALA93
AALA94
ASER562
AHOH898
AHOH1032

site_idAC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 708
ChainResidue
AARG532
AARG533
ATHR554
APHE557
AHIS561
ASER562
AGLY563
AGLY564
AALA565
AHOH841

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 709
ChainResidue
AGLU347
AARG370
AGOL712
AHOH852
AHOH1196
AHOH1405
AHOH1442
BHOH1189

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 710
ChainResidue
AASP393
AGLU397
ALYS610
AHOH1207

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 711
ChainResidue
AVAL159
AASP161
AVAL197
AALA199
AHOH1139
AHOH1172
AHOH1271

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 712
ChainResidue
AARG370
AGLU397
AGLU399
AGOL709
AHOH1293
BGOL711

site_idBC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 713
ChainResidue
ALEU590
AASP605
AHOH1233
AHOH1290
AHOH1309
BHIS515
BLYS610

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 714
ChainResidue
ALYS610
AARG612
AHOH1217
BLEU590
BASP605
BHOH1166

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CU B 701
ChainResidue
BHIS431
BHIS433
BHIS592
BHOH859
BHOH1042

site_idBC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE BR B 702
ChainResidue
BSER529
BARG532
BGLY563

site_idBC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE BR B 703
ChainResidue
BHIS345
BSER374

site_idBC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE BR B 704
ChainResidue
BGLY34
BPRO35
BGLU36

site_idCC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE BR B 705
ChainResidue
BASP128
BHOH1298

site_idCC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA B 706
ChainResidue
BASP440
BMET441
BASP581
BILE582
BHOH854

site_idCC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE K B 707
ChainResidue
BSER562
BHOH1099
BVAL79
BTHR80
BALA93
BALA94

site_idCC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 708
ChainResidue
BASN368
BASP393
BHOH902
BHOH1024
BHOH1074
BHOH1113

site_idCC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 709
ChainResidue
BVAL44
BLEU45
BASP46
BARG274
BARG551
BTYR552
BHOH938
BHOH974
BHOH1308

site_idCC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 710
ChainResidue
AHOH1244
BGLU347
BARG370
BGOL711
BHOH837
BHOH1003
BHOH1295
BHOH1310

site_idCC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 711
ChainResidue
AGOL712
BARG370
BTYR389
BGLU397
BGLU399
BGOL710
BHOH1181

site_idCC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL B 712
ChainResidue
AASP417
BSER471
BARG472

site_idCC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL B 713
ChainResidue
AHIS517
AHOH1233
BHIS517
BHOH1134

Functional Information from PROSITE/UniProt
site_idPS01164
Number of Residues14
DetailsCOPPER_AMINE_OXID_1 Copper amine oxidase topaquinone signature. MVIsfftTigNYDY
ChainResidueDetails
AMET371-TYR384

site_idPS01165
Number of Residues14
DetailsCOPPER_AMINE_OXID_2 Copper amine oxidase copper-binding site signature. TfGltHFprvEDwP
ChainResidueDetails
ATHR587-PRO600

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000250|UniProtKB:P12807
ChainResidueDetails
AASP298
BASP298

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Schiff-base intermediate with substrate; via topaquinone => ECO:0000250|UniProtKB:P12807
ChainResidueDetails
ATPQ382
BTPQ382

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P12807
ChainResidueDetails
ATYR296
BTYR296

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P46883
ChainResidueDetails
AILE379
BILE379

site_idSWS_FT_FI5
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:9405045, ECO:0007744|PDB:1AV4, ECO:0007744|PDB:1AVL, ECO:0007744|PDB:1IU7, ECO:0007744|PDB:1IVU, ECO:0007744|PDB:1IVV, ECO:0007744|PDB:1IVW, ECO:0007744|PDB:1IVX, ECO:0007744|PDB:1RJO, ECO:0007744|PDB:1SIH, ECO:0007744|PDB:1SII, ECO:0007744|PDB:1UI8, ECO:0007744|PDB:1W4N, ECO:0007744|PDB:1W5Z, ECO:0007744|PDB:1W6C, ECO:0007744|PDB:1W6G, ECO:0007744|PDB:2BT3, ECO:0007744|PDB:2CFD, ECO:0007744|PDB:2CFG, ECO:0007744|PDB:2CFK, ECO:0007744|PDB:2CFL, ECO:0007744|PDB:2CFW, ECO:0007744|PDB:2CG0, ECO:0007744|PDB:2CG1, ECO:0007744|PDB:2CWT, ECO:0007744|PDB:2CWU, ECO:0007744|PDB:2CWV, ECO:0007744|PDB:2D1W, ECO:0007744|PDB:2E2T, ECO:0007744|PDB:2E2U, ECO:0007744|PDB:2E2V, ECO:0007744|PDB:2YX9, ECO:0007744|PDB:2ZL8, ECO:0007744|PDB:3AMO, ECO:0007744|PDB:3KII, ECO:0007744|PDB:3KN4, ECO:0007744|PDB:3WA2, ECO:0007744|PDB:3WA3
ChainResidueDetails
AHIS431
AHIS433
AHIS592
BHIS431
BHIS433
BHIS592

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: 2',4',5'-topaquinone => ECO:0000269|PubMed:9405045
ChainResidueDetails
ATPQ382
BTPQ382

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PDB entries from 2024-05-01

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