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3RGF

Crystal Structure of human CDK8/CycC

Functional Information from GO Data
ChainGOidnamespacecontents
A0004672molecular_functionprotein kinase activity
A0005524molecular_functionATP binding
A0006468biological_processprotein phosphorylation
B0000307cellular_componentcyclin-dependent protein kinase holoenzyme complex
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0006357biological_processregulation of transcription by RNA polymerase II
B0016538molecular_functioncyclin-dependent protein serine/threonine kinase regulator activity
B0016592cellular_componentmediator complex
B0042802molecular_functionidentical protein binding
B0045023biological_processG0 to G1 transition
B0045746biological_processnegative regulation of Notch signaling pathway
B0045944biological_processpositive regulation of transcription by RNA polymerase II
B1990508cellular_componentCKM complex
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE BAX A 465
ChainResidue
AALA50
ATYR99
AALA100
AGLU101
ALEU142
AVAL147
AHIS149
AILE171
AALA172
AASP173
APHE176
ALYS52
AGLU66
ALEU70
ALEU73
AVAL78
AILE79
APHE97
AASP98

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 466
ChainResidue
ATRP267
AMET273
AASP319
APRO320
AHOH489

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 467
ChainResidue
APRO341
ATHR342
ASER343

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 468
ChainResidue
AARG125
ALYS303

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 469
ChainResidue
AHIS75
APRO76
AHOH508

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 284
ChainResidue
BGLN41
BTHR45
BTHR66
BPHE69
BLYS70
BTYR184

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 285
ChainResidue
AASP2
APHE5
BTYR76
BSER77
BLYS79

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 286
ChainResidue
BASN46
BARG185
BTRP241
BPHE244
BGLU246

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 287
ChainResidue
BGLU53
BLEU57
BGLN59
BILE62

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 288
ChainResidue
BGLN13
BTRP14
BARG75

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 289
ChainResidue
BASN133
BHIS134

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 290
ChainResidue
BARG25
BGLU34
BTYR37
BTRP38

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 291
ChainResidue
BALA0
BALA2
BGLN60
BVAL152
BARG157
BHOH342

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues26
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. VGRGTYGHVYkAkrkdgkddkd........YALK
ChainResidueDetails
AVAL27-LYS52

site_idPS00108
Number of Residues13
DetailsPROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. VlHrDLKpaNILV
ChainResidueDetails
AVAL147-VAL159

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17525332
ChainResidueDetails
BSER275

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
ChainResidueDetails
AVAL27
ALYS52

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PDB entries from 2024-05-01

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