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3Q24

X-ray crystal structure of the N4 mini-VRNAP and P2_7a promoter transcription initiation complex with pppGpG and pyrophosphate: product complex

Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE GTP A 1106
ChainResidue
AARG424
AHOH2160
AHOH2161
AHOH2211
AHOH2245
CDC5
CDA6
ALYS437
AARG440
AILE949
AASP951
AG1107
AHOH1545
AHOH1608
AHOH2158

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE G A 1107
ChainResidue
AARG424
AGLY564
APRO565
AASN671
ATHR674
ATYR678
AASP951
AGTP1106
AHOH1273
AHOH1432
AHOH2161
CDC4
CDC5

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE 2HP A 1108
ChainResidue
AGLN469
AILE473
ALYS474
AVAL475
AHIS476
AHOH1204
AHOH1250
AHOH1618

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE POP A 1109
ChainResidue
AGLY560
AVAL561
ATHR562
ATYR612
AARG666
ALYS670
AHOH1284
AHOH1612

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE 2HP B 1106
ChainResidue
BGLN469
BILE473
BLYS474
BVAL475
BHIS476
BHOH1876
BHOH1950
BHOH2646

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE POP B 1107
ChainResidue
BHIS476
BGLY560
BVAL561
BTHR562
BASP610
BTYR612
BARG666
BHOH1888
BHOH2130

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:21321236, ECO:0000269|PubMed:23235152
ChainResidueDetails
ALYS437
AASP559
ALYS670
AASP951
BLYS437
BASP559
BLYS670
BASP951

218853

PDB entries from 2024-04-24

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