3J6B
Structure of the yeast mitochondrial large ribosomal subunit
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| 0 | 0003735 | molecular_function | structural constituent of ribosome |
| 0 | 0005739 | cellular_component | mitochondrion |
| 0 | 0005743 | cellular_component | mitochondrial inner membrane |
| 0 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 0 | 0005840 | cellular_component | ribosome |
| 0 | 0006412 | biological_process | translation |
| 0 | 0008270 | molecular_function | zinc ion binding |
| 0 | 0032543 | biological_process | mitochondrial translation |
| 0 | 0042254 | biological_process | ribosome biogenesis |
| 1 | 0003735 | molecular_function | structural constituent of ribosome |
| 1 | 0005739 | cellular_component | mitochondrion |
| 1 | 0005743 | cellular_component | mitochondrial inner membrane |
| 1 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 1 | 0032543 | biological_process | mitochondrial translation |
| 1 | 0033617 | biological_process | mitochondrial respiratory chain complex IV assembly |
| 2 | 0003735 | molecular_function | structural constituent of ribosome |
| 2 | 0005739 | cellular_component | mitochondrion |
| 2 | 0005743 | cellular_component | mitochondrial inner membrane |
| 2 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 2 | 0032543 | biological_process | mitochondrial translation |
| 3 | 0003735 | molecular_function | structural constituent of ribosome |
| 3 | 0005739 | cellular_component | mitochondrion |
| 3 | 0005743 | cellular_component | mitochondrial inner membrane |
| 3 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 3 | 0006412 | biological_process | translation |
| 3 | 0032543 | biological_process | mitochondrial translation |
| 4 | 0003735 | molecular_function | structural constituent of ribosome |
| 4 | 0005739 | cellular_component | mitochondrion |
| 4 | 0005743 | cellular_component | mitochondrial inner membrane |
| 4 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 4 | 0032543 | biological_process | mitochondrial translation |
| 4 | 0045454 | biological_process | cell redox homeostasis |
| 5 | 0003725 | molecular_function | double-stranded RNA binding |
| 5 | 0003735 | molecular_function | structural constituent of ribosome |
| 5 | 0004525 | molecular_function | ribonuclease III activity |
| 5 | 0005739 | cellular_component | mitochondrion |
| 5 | 0005743 | cellular_component | mitochondrial inner membrane |
| 5 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 5 | 0006396 | biological_process | RNA processing |
| 5 | 0032543 | biological_process | mitochondrial translation |
| 6 | 0003735 | molecular_function | structural constituent of ribosome |
| 6 | 0005739 | cellular_component | mitochondrion |
| 6 | 0005743 | cellular_component | mitochondrial inner membrane |
| 6 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 6 | 0032543 | biological_process | mitochondrial translation |
| 7 | 0003735 | molecular_function | structural constituent of ribosome |
| 7 | 0005739 | cellular_component | mitochondrion |
| 7 | 0005743 | cellular_component | mitochondrial inner membrane |
| 7 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 7 | 0005840 | cellular_component | ribosome |
| 7 | 0006412 | biological_process | translation |
| 7 | 0032543 | biological_process | mitochondrial translation |
| 8 | 0003735 | molecular_function | structural constituent of ribosome |
| 8 | 0005739 | cellular_component | mitochondrion |
| 8 | 0005743 | cellular_component | mitochondrial inner membrane |
| 8 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 8 | 0032543 | biological_process | mitochondrial translation |
| 9 | 0003735 | molecular_function | structural constituent of ribosome |
| 9 | 0004525 | molecular_function | ribonuclease III activity |
| 9 | 0005739 | cellular_component | mitochondrion |
| 9 | 0005743 | cellular_component | mitochondrial inner membrane |
| 9 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 9 | 0006396 | biological_process | RNA processing |
| 9 | 0032543 | biological_process | mitochondrial translation |
| a | 0003735 | molecular_function | structural constituent of ribosome |
| a | 0005739 | cellular_component | mitochondrion |
| a | 0005743 | cellular_component | mitochondrial inner membrane |
| a | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| a | 0032543 | biological_process | mitochondrial translation |
| b | 0003735 | molecular_function | structural constituent of ribosome |
| b | 0005739 | cellular_component | mitochondrion |
| b | 0005743 | cellular_component | mitochondrial inner membrane |
| b | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| b | 0032543 | biological_process | mitochondrial translation |
| B | 0003723 | molecular_function | RNA binding |
| B | 0003735 | molecular_function | structural constituent of ribosome |
| B | 0005739 | cellular_component | mitochondrion |
| B | 0005743 | cellular_component | mitochondrial inner membrane |
| B | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| B | 0005840 | cellular_component | ribosome |
| B | 0006412 | biological_process | translation |
| B | 0015934 | cellular_component | large ribosomal subunit |
| B | 0016740 | molecular_function | transferase activity |
| B | 0032543 | biological_process | mitochondrial translation |
| c | 0003735 | molecular_function | structural constituent of ribosome |
| c | 0005739 | cellular_component | mitochondrion |
| c | 0005743 | cellular_component | mitochondrial inner membrane |
| c | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| c | 0032543 | biological_process | mitochondrial translation |
| C | 0003735 | molecular_function | structural constituent of ribosome |
| C | 0005739 | cellular_component | mitochondrion |
| C | 0005743 | cellular_component | mitochondrial inner membrane |
| C | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| C | 0005840 | cellular_component | ribosome |
| C | 0006412 | biological_process | translation |
| C | 0032543 | biological_process | mitochondrial translation |
| d | 0000150 | molecular_function | DNA strand exchange activity |
| d | 0003677 | molecular_function | DNA binding |
| d | 0003697 | molecular_function | single-stranded DNA binding |
| d | 0003735 | molecular_function | structural constituent of ribosome |
| d | 0005634 | cellular_component | nucleus |
| d | 0005739 | cellular_component | mitochondrion |
| d | 0005743 | cellular_component | mitochondrial inner membrane |
| d | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| d | 0006310 | biological_process | DNA recombination |
| d | 0006355 | biological_process | regulation of DNA-templated transcription |
| d | 0032543 | biological_process | mitochondrial translation |
| d | 0034599 | biological_process | cellular response to oxidative stress |
| d | 0090297 | biological_process | positive regulation of mitochondrial DNA replication |
| D | 0003735 | molecular_function | structural constituent of ribosome |
| D | 0005739 | cellular_component | mitochondrion |
| D | 0005743 | cellular_component | mitochondrial inner membrane |
| D | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| D | 0005840 | cellular_component | ribosome |
| D | 0006412 | biological_process | translation |
| D | 0006417 | biological_process | regulation of translation |
| D | 0032543 | biological_process | mitochondrial translation |
| E | 0003735 | molecular_function | structural constituent of ribosome |
| E | 0005739 | cellular_component | mitochondrion |
| E | 0005743 | cellular_component | mitochondrial inner membrane |
| E | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| E | 0005840 | cellular_component | ribosome |
| E | 0006412 | biological_process | translation |
| E | 0032543 | biological_process | mitochondrial translation |
| F | 0003735 | molecular_function | structural constituent of ribosome |
| F | 0005739 | cellular_component | mitochondrion |
| F | 0005743 | cellular_component | mitochondrial inner membrane |
| F | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| F | 0005840 | cellular_component | ribosome |
| F | 0006412 | biological_process | translation |
| F | 0019843 | molecular_function | rRNA binding |
| F | 0032543 | biological_process | mitochondrial translation |
| G | 0003735 | molecular_function | structural constituent of ribosome |
| G | 0005739 | cellular_component | mitochondrion |
| G | 0005743 | cellular_component | mitochondrial inner membrane |
| G | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| G | 0032543 | biological_process | mitochondrial translation |
| H | 0003735 | molecular_function | structural constituent of ribosome |
| H | 0005739 | cellular_component | mitochondrion |
| H | 0005743 | cellular_component | mitochondrial inner membrane |
| H | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| H | 0005840 | cellular_component | ribosome |
| H | 0006412 | biological_process | translation |
| H | 0017148 | biological_process | negative regulation of translation |
| H | 0032543 | biological_process | mitochondrial translation |
| I | 0003735 | molecular_function | structural constituent of ribosome |
| I | 0005739 | cellular_component | mitochondrion |
| I | 0005743 | cellular_component | mitochondrial inner membrane |
| I | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| I | 0005840 | cellular_component | ribosome |
| I | 0006412 | biological_process | translation |
| I | 0015934 | cellular_component | large ribosomal subunit |
| I | 0032543 | biological_process | mitochondrial translation |
| I | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
| J | 0003735 | molecular_function | structural constituent of ribosome |
| J | 0005739 | cellular_component | mitochondrion |
| J | 0005743 | cellular_component | mitochondrial inner membrane |
| J | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| J | 0006412 | biological_process | translation |
| J | 0015934 | cellular_component | large ribosomal subunit |
| J | 0032543 | biological_process | mitochondrial translation |
| J | 1990904 | cellular_component | ribonucleoprotein complex |
| K | 0003735 | molecular_function | structural constituent of ribosome |
| K | 0005739 | cellular_component | mitochondrion |
| K | 0005743 | cellular_component | mitochondrial inner membrane |
| K | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| K | 0005840 | cellular_component | ribosome |
| K | 0006412 | biological_process | translation |
| K | 0019843 | molecular_function | rRNA binding |
| K | 0032543 | biological_process | mitochondrial translation |
| L | 0003735 | molecular_function | structural constituent of ribosome |
| L | 0005739 | cellular_component | mitochondrion |
| L | 0005743 | cellular_component | mitochondrial inner membrane |
| L | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| L | 0005840 | cellular_component | ribosome |
| L | 0006412 | biological_process | translation |
| L | 0032543 | biological_process | mitochondrial translation |
| M | 0003735 | molecular_function | structural constituent of ribosome |
| M | 0005739 | cellular_component | mitochondrion |
| M | 0005743 | cellular_component | mitochondrial inner membrane |
| M | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| M | 0005840 | cellular_component | ribosome |
| M | 0006412 | biological_process | translation |
| M | 0032543 | biological_process | mitochondrial translation |
| N | 0003735 | molecular_function | structural constituent of ribosome |
| N | 0005737 | cellular_component | cytoplasm |
| N | 0005739 | cellular_component | mitochondrion |
| N | 0005743 | cellular_component | mitochondrial inner membrane |
| N | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| N | 0005840 | cellular_component | ribosome |
| N | 0032543 | biological_process | mitochondrial translation |
| O | 0003735 | molecular_function | structural constituent of ribosome |
| O | 0005515 | molecular_function | protein binding |
| O | 0005739 | cellular_component | mitochondrion |
| O | 0005743 | cellular_component | mitochondrial inner membrane |
| O | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| O | 0005840 | cellular_component | ribosome |
| O | 0006412 | biological_process | translation |
| O | 0015934 | cellular_component | large ribosomal subunit |
| O | 0032543 | biological_process | mitochondrial translation |
| P | 0003735 | molecular_function | structural constituent of ribosome |
| P | 0005515 | molecular_function | protein binding |
| P | 0005739 | cellular_component | mitochondrion |
| P | 0005743 | cellular_component | mitochondrial inner membrane |
| P | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| P | 0005840 | cellular_component | ribosome |
| P | 0006412 | biological_process | translation |
| P | 0032543 | biological_process | mitochondrial translation |
| Q | 0003735 | molecular_function | structural constituent of ribosome |
| Q | 0005515 | molecular_function | protein binding |
| Q | 0005739 | cellular_component | mitochondrion |
| Q | 0005743 | cellular_component | mitochondrial inner membrane |
| Q | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| Q | 0005840 | cellular_component | ribosome |
| Q | 0006412 | biological_process | translation |
| Q | 0032543 | biological_process | mitochondrial translation |
| Q | 0032991 | cellular_component | protein-containing complex |
| R | 0003735 | molecular_function | structural constituent of ribosome |
| R | 0005739 | cellular_component | mitochondrion |
| R | 0005743 | cellular_component | mitochondrial inner membrane |
| R | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| R | 0005840 | cellular_component | ribosome |
| R | 0006412 | biological_process | translation |
| R | 0032543 | biological_process | mitochondrial translation |
| R | 0033617 | biological_process | mitochondrial respiratory chain complex IV assembly |
| S | 0003735 | molecular_function | structural constituent of ribosome |
| S | 0005739 | cellular_component | mitochondrion |
| S | 0005743 | cellular_component | mitochondrial inner membrane |
| S | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| S | 0032543 | biological_process | mitochondrial translation |
| T | 0003735 | molecular_function | structural constituent of ribosome |
| T | 0005515 | molecular_function | protein binding |
| T | 0005739 | cellular_component | mitochondrion |
| T | 0005743 | cellular_component | mitochondrial inner membrane |
| T | 0005761 | cellular_component | mitochondrial ribosome |
| T | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| T | 0006412 | biological_process | translation |
| T | 0032543 | biological_process | mitochondrial translation |
| T | 1902775 | biological_process | mitochondrial large ribosomal subunit assembly |
| U | 0003735 | molecular_function | structural constituent of ribosome |
| U | 0005739 | cellular_component | mitochondrion |
| U | 0005743 | cellular_component | mitochondrial inner membrane |
| U | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| U | 0006412 | biological_process | translation |
| U | 0015934 | cellular_component | large ribosomal subunit |
| U | 0032543 | biological_process | mitochondrial translation |
| V | 0003735 | molecular_function | structural constituent of ribosome |
| V | 0005739 | cellular_component | mitochondrion |
| V | 0005743 | cellular_component | mitochondrial inner membrane |
| V | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| V | 0032543 | biological_process | mitochondrial translation |
| W | 0003735 | molecular_function | structural constituent of ribosome |
| W | 0005737 | cellular_component | cytoplasm |
| W | 0005739 | cellular_component | mitochondrion |
| W | 0005743 | cellular_component | mitochondrial inner membrane |
| W | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| W | 0006412 | biological_process | translation |
| W | 0008270 | molecular_function | zinc ion binding |
| W | 0015934 | cellular_component | large ribosomal subunit |
| W | 0032543 | biological_process | mitochondrial translation |
| W | 0044391 | cellular_component | ribosomal subunit |
| X | 0003735 | molecular_function | structural constituent of ribosome |
| X | 0005737 | cellular_component | cytoplasm |
| X | 0005739 | cellular_component | mitochondrion |
| X | 0005743 | cellular_component | mitochondrial inner membrane |
| X | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| X | 0005840 | cellular_component | ribosome |
| X | 0006412 | biological_process | translation |
| X | 0032543 | biological_process | mitochondrial translation |
| X | 0044391 | cellular_component | ribosomal subunit |
| Y | 0003735 | molecular_function | structural constituent of ribosome |
| Y | 0005634 | cellular_component | nucleus |
| Y | 0005737 | cellular_component | cytoplasm |
| Y | 0005739 | cellular_component | mitochondrion |
| Y | 0005743 | cellular_component | mitochondrial inner membrane |
| Y | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| Y | 0005840 | cellular_component | ribosome |
| Y | 0006412 | biological_process | translation |
| Y | 0032543 | biological_process | mitochondrial translation |
| Z | 0003735 | molecular_function | structural constituent of ribosome |
| Z | 0005739 | cellular_component | mitochondrion |
| Z | 0005743 | cellular_component | mitochondrial inner membrane |
| Z | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| Z | 0005840 | cellular_component | ribosome |
| Z | 0006412 | biological_process | translation |
| Z | 0015934 | cellular_component | large ribosomal subunit |
| Z | 0032543 | biological_process | mitochondrial translation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3301 |
| Chain | Residue |
| A | G245 |
| A | A327 |
| site_id | AC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3303 |
| Chain | Residue |
| A | U466 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3304 |
| Chain | Residue |
| A | A899 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3307 |
| Chain | Residue |
| A | G60 |
| site_id | AC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3311 |
| Chain | Residue |
| A | G2597 |
| site_id | AC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3312 |
| Chain | Residue |
| A | A2290 |
| site_id | AC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3314 |
| Chain | Residue |
| A | U3246 |
| site_id | AC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3315 |
| Chain | Residue |
| A | U1934 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3316 |
| Chain | Residue |
| A | G1285 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3317 |
| Chain | Residue |
| A | G477 |
| A | U1917 |
| A | G1918 |
| site_id | BC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3318 |
| Chain | Residue |
| A | G2720 |
| A | G2721 |
| site_id | BC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3319 |
| Chain | Residue |
| A | U2690 |
| A | A2695 |
| A | A2696 |
| site_id | BC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3320 |
| Chain | Residue |
| A | G718 |
| A | A2695 |
| A | A2696 |
| site_id | BC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3322 |
| Chain | Residue |
| A | C1622 |
| A | U1623 |
| site_id | BC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3325 |
| Chain | Residue |
| A | A1331 |
| A | A1579 |
| site_id | BC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3327 |
| Chain | Residue |
| A | G2859 |
| site_id | BC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3333 |
| Chain | Residue |
| A | A1397 |
| site_id | BC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3335 |
| Chain | Residue |
| A | G2953 |
| A | U2954 |
| A | G3058 |
| site_id | CC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3336 |
| Chain | Residue |
| A | G675 |
| A | A2855 |
| site_id | CC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3337 |
| Chain | Residue |
| A | A674 |
| A | G675 |
| A | U2856 |
| site_id | CC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3338 |
| Chain | Residue |
| A | G722 |
| site_id | CC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3339 |
| Chain | Residue |
| A | U467 |
| A | A899 |
| site_id | CC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3340 |
| Chain | Residue |
| A | A900 |
| A | A901 |
| site_id | CC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3341 |
| Chain | Residue |
| A | C2292 |
| site_id | CC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3342 |
| Chain | Residue |
| A | C2289 |
| R | SER42 |
| site_id | CC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3343 |
| Chain | Residue |
| A | A2294 |
| A | A2295 |
| site_id | CC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3344 |
| Chain | Residue |
| A | A2296 |
| A | G2297 |
| site_id | DC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3345 |
| Chain | Residue |
| A | G2291 |
| site_id | DC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3346 |
| Chain | Residue |
| A | A1302 |
| A | G1905 |
| site_id | DC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3347 |
| Chain | Residue |
| A | U1300 |
| A | A1301 |
| A | C1906 |
| site_id | DC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3348 |
| Chain | Residue |
| A | A1298 |
| A | U2882 |
| site_id | DC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3349 |
| Chain | Residue |
| A | A485 |
| A | A1282 |
| A | G1283 |
| site_id | DC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 3350 |
| Chain | Residue |
| A | A1621 |
| A | C1622 |
| A | U1623 |
| A | A2817 |
| site_id | DC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3351 |
| Chain | Residue |
| A | G630 |
| A | U1685 |
| site_id | DC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3352 |
| Chain | Residue |
| A | C1564 |
| site_id | DC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3353 |
| Chain | Residue |
| A | G1398 |
| site_id | EC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 3354 |
| Chain | Residue |
| A | C2948 |
| A | U2951 |
| A | G2952 |
| A | U3060 |
| site_id | EC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3355 |
| Chain | Residue |
| A | G1736 |
| B | ARG334 |
| site_id | EC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3356 |
| Chain | Residue |
| A | G1736 |
| site_id | EC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3357 |
| Chain | Residue |
| A | G394 |
| site_id | EC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3358 |
| Chain | Residue |
| A | C908 |
| c | LEU16 |
| site_id | EC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3361 |
| Chain | Residue |
| A | G671 |
| A | A673 |
| A | A674 |
| site_id | EC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3362 |
| Chain | Residue |
| A | A608 |
| A | G609 |
| site_id | EC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3363 |
| Chain | Residue |
| A | U631 |
| A | U632 |
| site_id | EC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3364 |
| Chain | Residue |
| A | U631 |
| A | A1690 |
| A | A1691 |
| site_id | FC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3365 |
| Chain | Residue |
| A | C1681 |
| site_id | FC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3366 |
| Chain | Residue |
| A | A1730 |
| site_id | FC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3367 |
| Chain | Residue |
| A | U660 |
| site_id | FC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3368 |
| Chain | Residue |
| A | G624 |
| A | A1670 |
| site_id | FC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3369 |
| Chain | Residue |
| A | A1670 |
| site_id | FC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3370 |
| Chain | Residue |
| A | U622 |
| A | C623 |
| A | G651 |
| site_id | FC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3371 |
| Chain | Residue |
| A | G1683 |
| site_id | FC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 3372 |
| Chain | Residue |
| A | U654 |
| A | A621 |
| A | U622 |
| A | A652 |
| site_id | FC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3373 |
| Chain | Residue |
| A | A1737 |
| A | A1738 |
| site_id | GC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3374 |
| Chain | Residue |
| A | G1297 |
| A | A1914 |
| site_id | GC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3375 |
| Chain | Residue |
| A | G639 |
| site_id | GC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3376 |
| Chain | Residue |
| A | G1304 |
| A | A1305 |
| A | U1600 |
| site_id | GC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3377 |
| Chain | Residue |
| A | C1329 |
| A | G1591 |
| site_id | GC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3379 |
| Chain | Residue |
| A | G868 |
| A | U869 |
| site_id | GC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3380 |
| Chain | Residue |
| A | G709 |
| A | G1221 |
| site_id | GC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3381 |
| Chain | Residue |
| A | A707 |
| A | G1221 |
| site_id | GC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 3382 |
| Chain | Residue |
| A | G915 |
| A | A916 |
| A | U917 |
| A | G1220 |
| site_id | GC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3383 |
| Chain | Residue |
| A | A951 |
| A | G1102 |
| site_id | HC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3384 |
| Chain | Residue |
| A | A952 |
| site_id | HC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3385 |
| Chain | Residue |
| A | C932 |
| A | A935 |
| A | A936 |
| site_id | HC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3386 |
| Chain | Residue |
| A | U1177 |
| A | A1178 |
| site_id | HC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3388 |
| Chain | Residue |
| A | A263 |
| A | A359 |
| site_id | HC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3389 |
| Chain | Residue |
| A | A258 |
| site_id | HC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3390 |
| Chain | Residue |
| A | A314 |
| A | A359 |
| b | ASP55 |
| site_id | HC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3391 |
| Chain | Residue |
| A | C2652 |
| site_id | HC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3392 |
| Chain | Residue |
| A | A871 |
| site_id | HC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3393 |
| Chain | Residue |
| A | A720 |
| A | A1967 |
| site_id | IC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 3394 |
| Chain | Residue |
| A | G696 |
| A | A720 |
| A | A721 |
| A | G722 |
| site_id | IC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3395 |
| Chain | Residue |
| A | A1223 |
| A | A1224 |
| J | GLY84 |
| site_id | IC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3396 |
| Chain | Residue |
| A | U869 |
| site_id | IC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3397 |
| Chain | Residue |
| A | A1287 |
| A | G1289 |
| site_id | IC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3398 |
| Chain | Residue |
| A | A1952 |
| A | G2843 |
| A | A2844 |
| site_id | IC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 3399 |
| Chain | Residue |
| A | A1951 |
| A | A1952 |
| A | G1953 |
| A | A2844 |
| A | A2881 |
| site_id | IC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3400 |
| Chain | Residue |
| A | G1953 |
| A | G1956 |
| A | A2844 |
| site_id | IC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3401 |
| Chain | Residue |
| A | U1928 |
| A | A1933 |
| site_id | IC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 3402 |
| Chain | Residue |
| A | G2721 |
| site_id | JC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 3403 |
| Chain | Residue |
| A | U874 |
| A | G888 |
| A | U889 |
| site_id | JC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3404 |
| Chain | Residue |
| A | U1099 |
| A | A1100 |
| site_id | JC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3405 |
| Chain | Residue |
| A | U948 |
| A | G949 |
| site_id | JC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3407 |
| Chain | Residue |
| A | U2784 |
| A | U2785 |
| site_id | JC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3408 |
| Chain | Residue |
| A | G427 |
| A | U1937 |
| site_id | JC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 3409 |
| Chain | Residue |
| A | A471 |
| A | A909 |
| site_id | JC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE NA B 500 |
| Chain | Residue |
| B | HIS345 |
| B | GLY346 |
| B | GLY347 |
| B | SER352 |
| B | SER354 |
| site_id | JC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG N 201 |
| Chain | Residue |
| A | C464 |
| N | THR134 |
| N | LYS135 |
| N | ASN138 |
| site_id | JC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ZN W 200 |
| Chain | Residue |
| W | CYS104 |
| W | SER106 |
| W | CYS107 |
| W | CYS117 |
| W | CYS120 |
| site_id | KC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN 0 100 |
| Chain | Residue |
| 0 | CYS66 |
| 0 | CYS69 |
| 0 | CYS82 |
| 0 | HIS88 |
Functional Information from PROSITE/UniProt
| site_id | PS00049 |
| Number of Residues | 28 |
| Details | RIBOSOMAL_L14 Ribosomal protein L14 signature. AIVVrskqrnmcrkDGstvaFgdTacVL |
| Chain | Residue | Details |
| I | ALA71-LEU98 |
| site_id | PS00467 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGVAmNKcD |
| Chain | Residue | Details |
| B | PRO331-ASP342 |
| site_id | PS00474 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_L3 Ribosomal protein L3 signature. FkegqyvDvrSvSkGKGftGvmkR |
| Chain | Residue | Details |
| C | PHE160-ARG183 |
| site_id | PS00525 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGI |
| Chain | Residue | Details |
| F | PRO191-ILE199 |
| site_id | PS00586 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KKpSKKYLNILK |
| Chain | Residue | Details |
| K | LYS209-LYS220 |
| site_id | PS00634 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_L30 Ribosomal protein L30 signature. IVksLgLgKrgSiVykkvnpaiagSLakVkeLV |
| Chain | Residue | Details |
| U | ILE22-VAL54 |
| site_id | PS00701 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGgfdhW |
| Chain | Residue | Details |
| K | ARG127-TRP138 |
| site_id | PS00783 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_L13 Ribosomal protein L13 signature. VSGMLPknkl.RKqrldrLkVFdG |
| Chain | Residue | Details |
| H | VAL109-GLY131 |
| site_id | PS00828 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L36 Ribosomal protein L36 signature. CsdCylVrRkgrVyIyCksnkKHkQrQ |
| Chain | Residue | Details |
| 0 | CYS66-GLN92 |
| site_id | PS00831 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_L27 Ribosomal protein L27 signature. GeIImRQRGtkfypG |
| Chain | Residue | Details |
| R | GLY60-GLY74 |
| site_id | PS01108 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_L24 Ribosomal protein L24 signature. GDrVvVMsGasKGni.AvI |
| Chain | Residue | Details |
| Q | GLY66-ILE83 |
| site_id | PS01167 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_L17 Ribosomal protein L17 signature. IvSThaKcKeasrvaErIITwTK |
| Chain | Residue | Details |
| L | ILE33-LYS55 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 20 |
| Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 77 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Propeptide: {"featureId":"PRO_0000030462","evidences":[{"source":"PubMed","id":"9151978","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 12 |
| Details | Compositional bias: {"description":"Gly residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 33 |
| Details | Domain: {"description":"KOW"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 10 |
| Details | Compositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"28154081","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21610694","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 66 |
| Details | Domain: {"description":"RNase III","evidences":[{"source":"PROSITE-ProRule","id":"PRU00177","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 70 |
| Details | Domain: {"description":"DRBM","evidences":[{"source":"PROSITE-ProRule","id":"PRU00266","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |






