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2R5P

Crystal Structure Analysis of HIV-1 Subtype C Protease Complexed with Indinavir

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
C0004190molecular_functionaspartic-type endopeptidase activity
C0006508biological_processproteolysis
D0004190molecular_functionaspartic-type endopeptidase activity
D0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 420
ChainResidue
AGLY73
ATHR74
AASN88
AHOH592
DARG41

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 421
ChainResidue
BTHR74
BASN88
BHOH490

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL C 422
ChainResidue
CTHR74
CASN88
BARG41

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL D 423
ChainResidue
DGLY73
DTHR74
DASN88
DHOH449

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 552
ChainResidue
AARG8
APRO9
BTHR26
BGLY27
BARG87
BHOH402

site_idAC6
Number of Residues20
DetailsBINDING SITE FOR RESIDUE MK1 B 902
ChainResidue
AARG8
ALEU23
AASP25
AGLY27
AGLY48
AGLY49
AVAL82
AILE84
BASP25
BGLY27
BALA28
BASP29
BASP30
BGLY48
BGLY49
BPRO81
BILE84
BHOH402
BHOH436
BHOH437

site_idAC7
Number of Residues19
DetailsBINDING SITE FOR RESIDUE MK1 D 902
ChainResidue
CARG8
CLEU23
CASP25
CGLY27
CGLY48
CGLY49
CVAL82
CILE84
DASP25
DGLY27
DALA28
DASP29
DASP30
DGLY48
DGLY49
DPRO81
DILE84
DHOH435
DHOH488

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVI
ChainResidueDetails
AALA22-ILE33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: For protease activity; shared with dimeric partner => ECO:0000255|PROSITE-ProRule:PRU10094
ChainResidueDetails
AASP25
BASP25
CASP25
DASP25

site_idSWS_FT_FI2
Number of Residues4
DetailsSITE: Cleavage; by viral protease => ECO:0000250
ChainResidueDetails
APHE99
BPHE99
CPHE99
DPHE99

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
ATHR26

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
BASP25
BTHR26

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
CASP25
CTHR26

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
DASP25
DTHR26

site_idCSA5
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25

site_idCSA6
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
BASP25

site_idCSA7
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
CASP25

site_idCSA8
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
DASP25

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PDB entries from 2024-07-24

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