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2PKS

Thrombin in complex with inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0005576cellular_componentextracellular region
A0006508biological_processproteolysis
A0007596biological_processblood coagulation
B0004252molecular_functionserine-type endopeptidase activity
B0005509molecular_functioncalcium ion binding
B0006508biological_processproteolysis
B0007596biological_processblood coagulation
C0004252molecular_functionserine-type endopeptidase activity
C0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA C 402
ChainResidue
CARG263
CLYS266
CHOH406
CHOH413

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE G44 C 101
ChainResidue
CSER256
CTRP257
CGLY258
CGLY260
CGLY268
CHOH405
CHOH408
BTRP86
CILE209
CASP229
CALA230
CSER235

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR CHAIN D OF HIRUDIN
ChainResidue
BPHE55
BGLN60
BLEU96
BARG98
BARG104
BTHR105
BARG106
BTYR107
BGLU112
BLYS113
BILE114

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
ChainResidueDetails
BLEU75-CYS80

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DAceGDSGGPFV
ChainResidueDetails
CASP229-VAL240

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Sulfotyrosine => ECO:0000250
ChainResidueDetails
DTYS363
BASP135

site_idSWS_FT_FI2
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19139490, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19838169, ECO:0000269|PubMed:873923
ChainResidueDetails
BASN89

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1hja
ChainResidueDetails
BASP135
BHIS79

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1hja
ChainResidueDetails
CGLY233
CSER235

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1hja
ChainResidueDetails
CGLY236
CSER235

227344

PDB entries from 2024-11-13

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