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2PKS

Thrombin in complex with inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyCCD
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths69.942, 71.843, 70.778
Unit cell angles90.00, 100.23, 90.00
Refinement procedure
Resolution69.670 - 2.500
Rwork0.185
R-free0.25900
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.019
RMSD bond angle1.915
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareREFMAC
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]69.6732.570
High resolution limit [Å]2.5002.500
Rmerge0.0860.526
Number of reflections10962
<I/σ(I)>6.71.8
Completeness [%]91.193.9
Redundancy2.32.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.329827% PEG8000, 0.1M SODIUM PHOSPHATE, PH 7.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
1VAPOR DIFFUSION, HANGING DROP7.329827% PEG8000, 0.1M SODIUM PHOSPHATE, PH 7.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
1VAPOR DIFFUSION, HANGING DROP7.329827% PEG8000, 0.1M SODIUM PHOSPHATE, PH 7.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K

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PDB entries from 2024-11-13

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