Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8SVM

Plasmodium falciparum M17 aminopeptidase bound to MMV1557817

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyCCD
Collection date2016-02-23
DetectorADSC QUANTUM 315r
Wavelength(s)0.9537
Spacegroup nameP 21 21 21
Unit cell lengths174.204, 177.926, 229.762
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.000 - 2.300
R-factor0.2068
Rwork0.204
R-free0.25210
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.667
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.0002.340
High resolution limit [Å]2.3002.300
Rmerge0.3312.129
Rmeas0.4022.614
Rpim0.2231.483
Total number of observations43972
Number of reflections30693914962
<I/σ(I)>3.91.5
Completeness [%]97.6
Redundancy32.9
CC(1/2)0.9310.150
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.529840% (v/v) PEG 400, 0.1 M Tris pH 8.5, 0.2 M Li2SO4

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon