8SJ0
Structure of ternary complex of cGAS with dsDNA and bound 2'-dATP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-06 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9202 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 77.503, 98.300, 143.205 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.800 - 2.550 |
R-factor | 0.1943 |
Rwork | 0.192 |
R-free | 0.23720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4lez |
RMSD bond length | 0.010 |
RMSD bond angle | 1.105 |
Data reduction software | XDS (20210205) |
Data scaling software | Aimless (0.7.7) |
Phasing software | MOLREP (11.7.03) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.800 | 2.670 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.081 | 0.745 |
Rmeas | 0.088 | 0.809 |
Rpim | 0.034 | 0.313 |
Total number of observations | 242193 | 27336 |
Number of reflections | 36058 | 4192 |
<I/σ(I)> | 13.2 | 2.4 |
Completeness [%] | 99.4 | |
Redundancy | 6.7 | 6.5 |
CC(1/2) | 0.998 | 0.791 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277.15 | 0.2 M ammonium acetate, 32% MPD, 0.1 M Bis-Tris pH 6.5 |