8E7C
Crystal Structure of Porcine Deltacoronavirus (HKU-15) Mpro with Pfizer Intravenous Inhibitor PF-00835231
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-22 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.54178 |
Spacegroup name | P 61 |
Unit cell lengths | 64.144, 64.144, 261.807 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 23.430 - 2.450 |
R-factor | 0.2009 |
Rwork | 0.193 |
R-free | 0.23490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7wku |
RMSD bond length | 0.002 |
RMSD bond angle | 0.489 |
Data reduction software | CrysalisPro |
Data scaling software | CrysalisPro |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 23.430 | 2.538 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.161 | 0.673 |
Rmeas | 0.201 | 0.841 |
Rpim | 0.118 | 0.498 |
Number of reflections | 20849 | 1863 |
<I/σ(I)> | 5.37 | 1.26 |
Completeness [%] | 93.5 | 83.92 |
Redundancy | 2.4 | 2.2 |
CC(1/2) | 0.973 | 0.452 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 10-20 % (w/v) PEG 3350, 0.20-0.30 M NaCl, and 0.1 M Bis-Tris methane pH 5.5 |