8E0F
Human Adenosine Deaminase Acting on dsRNA (ADAR2-RD) bound to dsRNA containing a G-G pair adjacent to the target site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-02-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 171.518, 63.389, 142.135 |
Unit cell angles | 90.00, 117.69, 90.00 |
Refinement procedure
Resolution | 65.730 - 2.700 |
R-factor | 0.1952 |
Rwork | 0.193 |
R-free | 0.23050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6vff |
Data reduction software | XDS |
Data scaling software | Aimless (2.7.28) |
Phasing software | PHENIX (1.18) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 125.850 | 125.850 | 2.820 |
High resolution limit [Å] | 2.700 | 9.350 | 2.700 |
Rmerge | 0.075 | 0.039 | 0.728 |
Rmeas | 0.091 | 0.047 | 0.888 |
Rpim | 0.051 | 0.026 | 0.500 |
Total number of observations | 112747 | ||
Number of reflections | 36652 | 910 | 4467 |
<I/σ(I)> | 9.6 | ||
Completeness [%] | 97.8 | 94.2 | 98.6 |
Redundancy | 3.1 | 3.1 | 3 |
CC(1/2) | 0.995 | 0.995 | 0.616 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 50 mM MOPS pH 7.0, 17% (w/v) PEG 4000, 200 mM NaCl |