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8E0F

Human Adenosine Deaminase Acting on dsRNA (ADAR2-RD) bound to dsRNA containing a G-G pair adjacent to the target site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2022-02-26
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9792
Spacegroup nameC 1 2 1
Unit cell lengths171.518, 63.389, 142.135
Unit cell angles90.00, 117.69, 90.00
Refinement procedure
Resolution65.730 - 2.700
R-factor0.1952
Rwork0.193
R-free0.23050
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6vff
Data reduction softwareXDS
Data scaling softwareAimless (2.7.28)
Phasing softwarePHENIX (1.18)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]125.850125.8502.820
High resolution limit [Å]2.7009.3502.700
Rmerge0.0750.0390.728
Rmeas0.0910.0470.888
Rpim0.0510.0260.500
Total number of observations112747
Number of reflections366529104467
<I/σ(I)>9.6
Completeness [%]97.894.298.6
Redundancy3.13.13
CC(1/2)0.9950.9950.616
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729850 mM MOPS pH 7.0, 17% (w/v) PEG 4000, 200 mM NaCl

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PDB entries from 2024-10-30

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