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8DNT

SARS-CoV-2 specific T cell receptor

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-24
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.033
Spacegroup nameC 1 2 1
Unit cell lengths182.158, 121.827, 210.555
Unit cell angles90.00, 100.02, 90.00
Refinement procedure
Resolution30.000 - 3.180
R-factor0.2256
Rwork0.221
R-free0.31260
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6vrn
RMSD bond length0.002
RMSD bond angle0.831
Data reduction softwareautoPROC
Data scaling softwareAimless (0.7.7)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.70048.7003.190
High resolution limit [Å]3.11013.9103.110
Rmerge0.0970.0241.381
Rmeas0.1210.0291.950
Rpim0.0710.0171.377
Total number of observations16322025104296
Number of reflections643858732708
<I/σ(I)>837.50.4
Completeness [%]79.291.545.5
Redundancy2.52.91.6
CC(1/2)0.9970.9990.249
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION8.529513.5% (w/v) PEG 20,000, 0.1 M Tris-HCl

219869

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