8D51
Parathyroid hormone 1 receptor extracellular domain complexed with a peptide ligand containing beta-3-homotryptophan
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-06 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.920105 |
Spacegroup name | H 3 2 |
Unit cell lengths | 58.472, 58.472, 206.331 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.140 - 2.000 |
R-factor | 0.2236 |
Rwork | 0.222 |
R-free | 0.24630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3h3g |
RMSD bond length | 0.002 |
RMSD bond angle | 0.442 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.18rc7_3834) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.179 | 2.206 |
High resolution limit [Å] | 1.997 | 1.997 |
Rmerge | 0.052 | 0.831 |
Rmeas | 0.063 | 0.947 |
Rpim | 0.027 | 0.628 |
Number of reflections | 7236 | 362 |
<I/σ(I)> | 12.6 | 1.5 |
Completeness [%] | 75.2 | |
Redundancy | 5.4 | |
CC(1/2) | 0.999 | 0.843 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 28 % v/v PEG Smear Low, 0.1 M tris-HCl pH 8, 0.15 M Sodium citrate, 1% ethylene glycol, 1 mM ZnSO4 |