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7UY3

Crystal structure of human Fgr tyrosine kinase in complex with TL02-59

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2018-03-29
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9757
Spacegroup nameP 65 2 2
Unit cell lengths151.285, 151.285, 130.518
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.233 - 2.990
R-factor0.2074
Rwork0.203
R-free0.24730
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2src
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.23346.2333.070
High resolution limit [Å]2.99013.3702.990
Rmerge0.1250.0790.804
Rmeas0.1310.0840.840
Number of reflections337052501311
<I/σ(I)>11.8921.972.07
Completeness [%]99.995.899.8
Redundancy10.9548.80411.23
CC(1/2)0.9970.9960.909
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.5277For co-crystallization with TL02-59, Fgr (3.2 mg/mL in 20 mM Tris-HCl, pH 8.3, 100 mM NaCl, and 2 mM TCEP) was mixed with 10 mM TL02-59 (in 100% DMSO) to a final concentration of 120 microM (0.6% DMSO final) and incubated for thirty minutes at 298 K. Diffraction quality crystals were grown by sitting- and hanging-drop vapor diffusion at 277 K by mixing Fgr/TL02-59 in a 1:1 ratio with the mother liquor (0.1 M HEPES, pH 7.5, 0.8 M sodium phosphate, 0.8 M potassium phosphate and 1% 1,2-butanediol)

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PDB entries from 2025-05-28

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