7S81
Structure of human PARP1 domains (Zn1, Zn3, WGR, HD) bound to a DNA double strand break.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-06 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 104.759, 128.552, 227.379 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.350 - 3.600 |
R-factor | 0.2547 |
Rwork | 0.252 |
R-free | 0.31220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dqy |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.350 | 49.350 | 3.760 |
High resolution limit [Å] | 3.600 | 12.470 | 3.600 |
Rmerge | 0.093 | 0.043 | 1.293 |
Rmeas | 0.098 | 0.045 | 1.352 |
Rpim | 0.029 | 0.014 | 0.391 |
Total number of observations | 414757 | 9908 | 52004 |
Number of reflections | 36391 | 983 | 4386 |
<I/σ(I)> | 13.8 | 56.6 | 2 |
Completeness [%] | 100.0 | 98.6 | 100 |
Redundancy | 11.4 | 10.1 | 11.9 |
CC(1/2) | 0.999 | 0.999 | 0.807 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Tert-butanol, Tris pH 8.5 |