7S6B
Crystal structure of modular polyketide synthase apo-Lsd14 from the Lasalocid biosynthesis pathway, trapped in the transacylation step
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 |
Unit cell lengths | 87.740, 92.850, 107.450 |
Unit cell angles | 99.63, 94.93, 106.07 |
Refinement procedure
Resolution | 39.200 - 2.350 |
R-factor | 0.2076 |
Rwork | 0.206 |
R-free | 0.24110 |
Structure solution method | SAD |
RMSD bond length | 0.007 |
RMSD bond angle | 0.890 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | BUSTER (2.10.4) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.200 | 2.410 |
High resolution limit [Å] | 2.350 | 2.350 |
Number of reflections | 130003 | 9300 |
<I/σ(I)> | 18.5 | 1.3 |
Completeness [%] | 98.1 | 94.2 |
Redundancy | 26.3 | 15.2 |
CC(1/2) | 0.999 | 0.683 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 291 | 0.2 M lithium sulfate, 0.015 M magnesium sulfate, 0.1 M sodium acetate, pH 4.0, and 22% polyacrylic acid 5100 |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 291 | 0.2 M lithium sulfate, 0.015 M magnesium sulfate, 0.1 M sodium acetate, pH 4.0, and 22% polyacrylic acid 5100 |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 291 | 0.2 M lithium sulfate, 0.015 M magnesium sulfate, 0.1 M sodium acetate, pH 4.0, and 22% polyacrylic acid 5100 |