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7QDT

Crystal structure of a mutant (P393GX) Thyroid Receptor Alpha ligand binding domain designed to model dominant negative human mutations.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2015-10-03
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9690
Spacegroup nameP 64 2 2
Unit cell lengths143.328, 143.328, 88.502
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution72.060 - 3.000
R-factor0.18555
Rwork0.183
R-free0.22754
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2h79
RMSD bond length0.016
RMSD bond angle2.059
Data reduction softwareMOSFLM (7.2.2)
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER (3.16.1)
Refinement softwareREFMAC (5.8.0218)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]72.0603.180
High resolution limit [Å]3.0003.000
Rmerge0.1350.700
Rmeas0.1390.721
Rpim0.0340.170
Number of reflections112081764
<I/σ(I)>225.3
Completeness [%]100.0100
Redundancy16.5
CC(1/2)0.9990.948
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52930.2 M Sodium Chloride, 0.1 M Tris pH 8.5, 1.0 M Lithium Sulphate

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PDB entries from 2024-07-17

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