7O56
X-ray Structure of Interferon Regulatory Factor 4 DNA binding domain bound to an interferon-stimulated response element solved by Phosphorus and Sulphur SAD methods
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I23 |
Synchrotron site | Diamond |
Beamline | I23 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-14 |
Detector | DECTRIS PILATUS 12M |
Wavelength(s) | 2.7552 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 77.880, 112.440, 140.660 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 70.330 - 2.600 |
R-factor | 0.2136 |
Rwork | 0.212 |
R-free | 0.24130 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.239 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | CRANK2 |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.330 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.103 | 2.760 |
Rmeas | 0.104 | 2.781 |
Number of reflections | 19282 | 1865 |
<I/σ(I)> | 41.49 | 1.65 |
Completeness [%] | 99.2 | 98.1 |
Redundancy | 81 | 66.1 |
CC(1/2) | 1.000 | 0.750 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.2 | 293 | 0.1M sodium acetate, 5% PEG 4000, 10mM EDTA |