7NX4
Crystal structure of the TG and EGF-like domains of ALK
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-29 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0332 |
Spacegroup name | I 41 |
Unit cell lengths | 84.930, 84.930, 148.666 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.050 - 3.000 |
R-factor | 0.2205 |
Rwork | 0.219 |
R-free | 0.24710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7nx3 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.528 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.050 | 3.180 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmeas | 0.189 | 1.150 |
Number of reflections | 10550 | 1714 |
<I/σ(I)> | 10.15 | |
Completeness [%] | 99.9 | |
Redundancy | 14.3 | |
CC(1/2) | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 287 | to 0.5mM Manganese(II) chloride tetrahydrate, 0.5mM Cobalt(II) chloride hexahydrate, 0.5mM Nickel(II) chloride hexahydrate, 0.5mM Zinc acetate dihydrate, 13% w/v PEG 3000, 28% v/v 1,2,4- Butanetriol, 1% w/v NDSB 256 |